RNA id: XM_043220324.1


Basic Information

Item Value
RNA id XM_043220324.1
length 2826
RNA type mRNA
GC content 0.51
exon number 15
gene id dcbld1
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 23164445 ~ 23192385 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgctaaagaaataaaaagtaaaaaataaaagctgttttaatacAACTAGACATGCCTGAAGCTGAGGAAACAAACGTCGTTTTTTTCCTATCAGTGTCACTTTTTATCCTCGCCACACTCAGTATGCATGCTAGGCCCCTGCAGTAAGGGTCTGACACCGGCCGGACCCGTCAGACCGGTCTAGTAACCGCTTGGTGCCGCCTGTGGGAGAGAAACGCGGAAGAGTTCATTCAAGGCGTTCGGGGCTCCTCGGGCACACGTACGCGAGTTTCTCCCGGCGAACATGCTCCGGTGACGCTTCCCCAACGCGTCCCCCGCGTTTCGCTCTCGTTCAGCGGAGATGTCCGGACACGCGCTGCTGCACGCGCTGATCCTCTTCTGTTCGGTGCTCGCCGAGAAACCGGATGATGGCTGTGGTCATTATGTCCTCGGTCAAGAGAGCGGTGTCTTGTCCTCAAAGAACTACCCAGGAACGTACCCCAACAACTCCTGGTGTGAATGGCGAGTCCATGTACCCATTGGCCACACTATTGTCCTAAAGTTTGGAGACCTGAACATGGAGAAGAAAGACTGCGAGACTGACTATTTGAAGGTTCTGAAAGGATCATATGGGACAGAAAACGTTTACTGGCAGTACTGCGGTGGTCAGATGCCCAAGCCCACTCAAATTCACACGGACTCCAGCGACGTGATCGTGCGCTTTCGCAGCAGCCAGCACATCTCTGGAAGAGGATTTCTGCTTTCATACTCCACCGAAAACCACAAAGAGCTGCTGACATGCTTGGACAGAGGCAGTCATTTCCCAACACCAAAGTACAGGAAGTACTGTCCGGCCGGATGCGCAGCGGTGACGGGAGACGTGTCTGGGGACATTTCCCTGGGCTACAGACATacATCAGTTTTGTGTAAAGCAGCCGTGCATGCTGGGGTCATCATGGACCAGTTTGGAGGACCAATCACGGTGGAGGAGCGCCGAGGGCTCAGTCATTACCCTGCGGTCAGAGCCAACGGCATCCAGTCAAAAGAtGGCTCGTTGTCTGAAACCCTCTTCACATTTGTGACAAACGATTGCAGCCAACAGACTGTTCTTCAACCCGTGAGCACCACTACAAGCTTGTCGTCACACAACATCTCTTCCGACGGGTTTGAAGTCGACTGGTTTCCTAACAGCACCCGTCCATCTGTTGCTGATGACCTTAATAGTAGCCATCCAAAATGGCTCCAGATTGACCTCGGAGAAAAAAGGAGGATCACAGGCATTCTGACCACGGGCTTGACCGTCGCAGGCTCTGAATATTTCGTAAAAAACTACAAGATCGAGTACAAAGAGAGGAGTCGCTGGCGAACATTTGTCCAATATAATAACTCTGATGAAATGGTGTTTGAAGGAAACACTGACAGCGTCCATCAAACACGCAACACCTTCCACCCCTCCATCGTCGCTCGAAGTCTTCGAGTCATGCCTCAACAGTGGCACCGGTCAATCGCTATGAGATTGCAGCTACTGGGCTGTCCTTACGTTAAACCCATCCCAGTGAATTCATCATCTCCGGTGACGCAGGAGGTCCGGCCTACACAGTCCATTCACAGAGACATGACCAAACCAATGGCCTCTCAGGCTGATCTCGTTAATCTGGTCATAATAATTGTGCCAACCATTCTGCTTGTGGTCCTGCTCCTCGTGGGAATCTGCGTGGTTAAAATGCTATACAATAAGAAGACAAAGGAGAACACGTATGGCTCCGCGGAGACGCATACAGGCTGTTGGAGGCAGATAAAACAGCCGTTTGCCAGACACCAGTCCACAGAGTTCACCATCAAATACAGCTCTGAGAAAGATCCCATCCAGAAGCTGGACCTGGTAACCAGCGCCATGGCAGcCGAGTACCAGCAGCCTCTCATGCTCGGCACAGACACGGTTTCTCGAAAAGGCTCAACGTTCAGACCCATGGACACTGAGGCCAAAGACAAAGACGTCGAGGCTACTTCTCACTACGACCACCTGCAGACGGGCATCCAGTACGCCCTGCCACTGACCAATCAGGAGCCGGAGTATGCCACGCCCATCATCGAGCGCCACGCCTTCCGCCAAGATCCCTTCCTTCCGGATCCCAGCTACAGTGTCCCAGGCGTGGTCCTAAACAAAAGCCCGTCGTTCCGAGCCGTGGAGGGCAGTAACTGCAGGAAAGTGATCGGCGGGCTGGCCAAGGTCTACCAGACGCCCCACGTCAAAACGGAGCGGGGAAATTACCCAGAGGACATCTACGACAGCCCTAAAATCAGGAAACCCGTCGTGAAGAACGGGAGTTGCTCTGAGTACCAGAGACCCCAGATTAAATCTCCGGTTCAAGAGTGCTATTCCACTCCCAGAGACTGCATCAGACTGCCTTTCTCCGGACTCAGACCGGACCCCGAGGGAAGCAGGTCCGACCCGGAGGGCAGCAGCTCTGAAGGAAGCTGAGAAGAACCACACTGTGACGTGCCTGATCTCCTCAACAAAACCACCTCCAGACTCTAACTTATTCGTGCATGAGGGACAACCTTTTGCGTTTTTGCGAAGGCCGTAATGGATGCCATCGGTTTTgtgtaatttaacttttttttttttttttttttgtatatatatatgatgcatTTTGTCTTGACATATcaagatttgtaaaaaaaaaaaaattgtgctgttTGTTCCCCGTTCATCCCCTACGGACACAAACTGTGAATGCGAGCCAGATTTTCATGTATTCTACAATGTGACCATCATCTTTATTTTCCACTTTGAACAGAATTGCCCTAAAGAGCAAGTtcactgccttttttttttttttt

Function

GO:

id name namespace
GO:0007155 cell adhesion biological_process

KEGG:

id description
K24794 DCBLD; discoidin, CUB and LCCL domain-containing protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU208355 lncRNA upstream 90780 23066587 ~ 23073665 (+) True G141168
TU208287 lncRNA upstream 241317 22920693 ~ 22923128 (+) True G141121
TU208271 lncRNA upstream 304118 22858989 ~ 22860327 (+) False si:ch211-203k16.3
TU208266 lncRNA upstream 418659 22745420 ~ 22745786 (+) False matn3a
TU208246 lncRNA upstream 606943 22557229 ~ 22557502 (+) True G141091
XR_006247220.1 lncRNA downstream 2236 23194621 ~ 23206082 (+) False LOC122324747
XR_006247221.1 lncRNA downstream 2236 23194621 ~ 23206082 (+) False LOC122324747
TU208384 lncRNA downstream 2606 23194991 ~ 23196194 (+) False LOC122324747
XR_006247218.1 lncRNA downstream 2768 23195153 ~ 23206082 (+) True LOC122324747
XR_006247219.1 lncRNA downstream 2768 23195153 ~ 23206082 (+) False LOC122324747
XM_043218701.1 mRNA upstream 17469 23142907 ~ 23146976 (+) True vgll2a
XM_043218702.1 mRNA upstream 17469 23142907 ~ 23146976 (+) False vgll2a
XM_043218620.1 mRNA upstream 45309 23109345 ~ 23119136 (+) False rfx6
XM_043218619.1 mRNA upstream 45309 23109966 ~ 23119136 (+) True rfx6
XM_043219202.1 mRNA upstream 102169 23055116 ~ 23062276 (+) True plg
XM_043219390.1 mRNA downstream 18405 23210790 ~ 23214047 (+) True LOC122324745
XM_043220397.1 mRNA downstream 22691 23215076 ~ 23222915 (+) False nus1
XM_043220396.1 mRNA downstream 22693 23215078 ~ 23222915 (+) True nus1
XM_043220395.1 mRNA downstream 39999 23232384 ~ 23311466 (+) True slc35f1
XM_043220394.1 mRNA downstream 119814 23312199 ~ 23320816 (+) True si:dkeyp-114g9.1
unassigned_transcript_2513 other upstream 64157 23100206 ~ 23100288 (+) True trnal-cag_35
TU208163 other upstream 646770 22506767 ~ 22517675 (+) False fkbp1b
XR_006247241.1 other upstream 687671 22471786 ~ 22476774 (+) False ubxn2a
TU207855 other upstream 1319744 21844146 ~ 21844701 (+) True G140785
XR_006247231.1 other upstream 1965826 21168775 ~ 21198619 (+) False ipo13b
TU208810 other downstream 880486 24072871 ~ 24074423 (+) False G141475
TU208811 other downstream 880486 24072871 ~ 24074423 (+) False G141475
TU208812 other downstream 880486 24072871 ~ 24074423 (+) True G141475
TU208889 other downstream 1247858 24440243 ~ 24493381 (+) True G141524
XR_006247270.1 other downstream 1776495 24968880 ~ 24992667 (+) False LOC122325234

Expression Profile