RNA id: XM_043220328.1


Basic Information

Item Value
RNA id XM_043220328.1
length 7515
RNA type mRNA
GC content 0.43
exon number 15
gene id kif26bb
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18134188 ~ 18151673 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAAATCCTTTAATGAGCATTGCAAATGTCCATGCACATAAAAAAAGGTACAATGGCCTTTTTAAAAGTCGCCCTTATTATTTATAAAccgtttgttttaaaatacggATAACAGTTGAATAACTCCCCCATCCCCGGTGTTTTCATAAACCTCTCAATGTTTATCTCATGCTTACTCGTTTAACAGGTTTCCTTTAGCCGGGAATGACTTTAAGGAAATAAATGTTGActatgcaaaaaatgtaaaataaaagcgTTTAGTTGAATAgtgtattatgaaataaaaggttttttttaaaaaaattaaaagcccCCTCATATTTTGTCCCAAGTTTGTGGGCCTTTTAGCTCAAATGGGGAGTAAAAGACCCCCTCAACATAAGACAAAAAGGAGGATGGACAATTGTTAAAAACGATTAATGTATGCACCtttaacaaaagagaaaaagtttTATCTCAGACTACACAACACatcctaatattttttttcatcacacACAGTCATTTCAATTCCTCGTGCTGTGAttgcacaaatacaaaaaataaactagCAATTTCTAAACTAAAACTACATAAATCCGCATGGGATGCACCGTCTGCGTATTTAAATGTTAGTCGATAGGTGGCGCTATCTCATGATCAATCTCTCTATATGATAACCACAGTGTTTGTGATCTCAATTCCTTAGAGCAATGACAAGTGGGTGGTACTGCACCGGAGAACAAAAAAGATGAAGACATAATGCAACAACAACCCAAGGATGAATAGgctataaaagcttttttttttgttcatcacACGGCCTTATAGTTTCCCTGCGGAATAAAGTTGAAATTgcgcattaaaaaaacaacggCAACTTACGGAAGATTTAATTCAAAGACTTTCGAGTAAACAGAAATTATTCACCTTTACTCACCGGAGTTCTCCAAGAACATAAAAGCACCGTGGGCGAAATCACAGGATGCGCTACGAAGACAATGCATCTCTTTCTCATCGAAgttaattcagctttttttttgcatggaacataatttattttttttatttgaaacgaATGGAAACTTGTTGTGTAGGACGCGTTGAGACAGCGATTTTATTGAGCGCCCATTCGTACAGAATATGAAGAATCAAACAGGATACTGCGAAACAACAGGCGGTGAGCGGTTCGTGATGAGCGACGTTAAAATGAGTCCCGTGTTCAGGGGTCACTCGGCGGCAGCGCAGAAAGAGCGTCTCCCGCCCGAAGGCGCTGGCTCTTCGGCGTATGATGCCCATGCAGCACCTTGGACAGGGTTCGCTTGCTCCTTCCCGACACCCCTCACAGACTCTCTCCTGCGGTCGAAATGGTCCAAAGAGTCGTTAAACGGCTACCCCCCTGAATACAACTCCATCAAGTCCAGCGGGACGAAAAGAGAGGCGTTATTCGCCGCAGGAAATCTGTGCAAAAAGTGCATCTCTCACTTCAACGTCTTCAAAAGGGAGGCGTTAAAACAAGTAACCGACGGAAACCTTTCTAGCAAAGATCCCAAAgtcttcattcatctttatgAGAGCATGAAACCACCTGCTAGTACTGTAGAAGCCTGGGGCAACGCGGATGGACGCTGTGGCGTCTGCTCCACTCATTTTAGCCAGCTGAAGCAGGAGGCTATCCGCACGATCCTTAACCAGGACCGGGCCATATGGGCTCCACCTACCACTGCCAACATCCCATCCACAAGCCTAGACGCAGGCTCACTAACACTCCCCAGAACCTCAAGCCACCGATCTGTTGTCTCAGACCCCCATCAGAGGCCTAGCAATGCAGCACCGGATTGCTGGATTAAAGGACGTCAGCATTTGGAGGCCCTGTGGCCCTTGTCCTCATGCAAAGGAAACAATTCCATGTCTCAAAAGTCCTCCCAGAGTCCTTTGCATTCAGGGAAGGTGAATGAAAAGGAGAGCGTAACCTCTACAGCACTATGCAACTACGGCGCCACACAGCCGACGCGTTCTTCCAGTATGTCCTCTCTGCTCCCCGCAGGGACATCTGCTGCCTTGTCTTTCTTTGTCAGGGCAGCACAGAAGTTGAACGTAATGGTTAGAAGAGGAAGGCACTTCTCAGAGAGCAGTGCTTCTCAACGCATGACGAACTTCAGTGGTCTTCTGCAGAAATCACCTCCTCTAGCACCAGCAAACATTATTCAAGCTGCTAGTAAGAGCAAGGAAACACAAGGGATGGGAAAGGTCAAAGTGATGTTGCGTGTGTGTTCAGTTCCTGCGTCTGACCCATCTCGGTCCTATTCCTTCAAACTGGACCTGCAAAAGAAACAGATCACAGTGCTGAATGTACCCACCTTCAACCCTCAGAGACAGACTGCTGGAACTACAGTCTCCTCAAAGACCTTCACCTTTGATGCTGCCTTCGCTCCTGAATCAACCCAGgcaGAAGTGTGTGAGAACAGCTTGTGTGAAGTCCTGCAGTGTGTGCTTGCAGGAGCCGATGGTTGTGTCCTAAGCTTTGGACAAACCAGTGTGGGAATGTCTTACACAATGATTGGCCACGATGGTTGCACTCAAAGCCTAGGAGTTATTCCTTGTGCTATATCTTGGCTTTTCAAGCTCATTACCAGGAAGAAAGACAAGACATGGGCAAACATCTCAGTTTCCGTGTCAGCTGTAGAGGTCTGTGGGGAAAACAATGGCATCAGGGATTTACTCGCTGATGTTGACACGGGCAACTGCAAGGAGACCTATAGACCAGATGCTTACCTCAAAGAGGACCCCGTCTGTGGAGTACAACTCTGCAACCACAGTGTACTAAATGCTCCAACTCCAGAAAGAGCAGCTTTCCTACTAGATACAGCCCTTGCGTCTCGCAGTGGGATAGTGGACAGTGGAGGGAGACCACCACATTGCTGTCACATGTTCTTCACCCTGCATGTTCGCCAACAGCACATAGGAAGCAGCACCAAATCTGGGATGAATGTGGATCAAAGCAAGCTCAGCCTGATCGATTTGGGGAGCTGTGTGGGAGACAGGGAAGGAAGCAACTGTGGAGTCTGCCTCGCGGAGCTTGGAAACTTTATCACAGCCAATCTCAACAGACATAATCACGTCCCTAATAGGGGAAGTAAATTAGGCATGCTTTTGCAAGACTCTCTGAGCAATGTCAACTGCTCCACCACAATTATTGCTCATATATCCACCATGTCGGAGGACCTTACAGAAAGCCTTTGTACGATGCAGACTGTGACTCGAATGCGAAGGCAGAAAAAGAAGATAAGGaaatccTCCTCAAGCTCGCCTGGAGGAAGAAGCTTAGGCAACGAGAGGAAATTTAATAATTCCACCAAGCTGAGATTCCAATCTACAGGAACACTGGATCAAGATCTCTCCTCTCCCGGTTTCTCTAGTGATCCAGTATTTTACCCTGGGAGTGACAAGTCTTGTGATACCATTATCTCTATGGATCCTTCTGGTCTCTTAGATAAAGAGGTTACAAATAGAAGCAGAGAGGTTTTGCCTATAATTCCATCTTTACTCAAAAGCAAATTGGAGTCCAAGAAGCTCTCGCTGATGAAGTTTTGTGAAATCTCTCCACCAATTGCCAATCGCATGAAGcaaatatcaaaagaaaaaactaaagaagAGTCAACACCAacaattttacaagaaaaatcaGATTTTGAGTGCCTGAAGTGCAACACATTTGCAGAACTTCAAAATCGACTGGGAACCATAGACGGAACAGAGTTGGATCTATGTAAAGATCAGGAAGTGAACACTATGAGAAAACCACCTCGTTTAAGCCAAACCAAAAAGAAATCCAATTCATTGGACATTCAAGCGTTAAACAACAGAGAACCCAATAGTACCAGACAAGGAAACACCTCAAAAACATTTGCCATAATTCACAACAGTGAAGAAATTTCAAGTGCCACCAATTCAGCGATTATTCAACCACAGTTAGATGTTGTCAAACCGAGTGCACCTGTGCTATCTAGCCAACATCTAAGCAAATCTAAGCTTcatgataaaataatgaatatgatGCCCACTGCACTATCTTTGAAATTGGAAGACCAAGGTAAAATAAGATTATCGGATAATTCCACAATGCAATCTGAGACTCGAATATCTCCTATCGGCAAGAGTTCTCCGAGGTctacctcttcttcttctttttcatcaTCCCTGTCTTCCAGTTTGAGCTCCCCACCTGCTGTTTCTGCCTCTTTGAATAGAGACATTCCACATTgtacaggaaaaaaacagagagagatgaggGCCACAATCACTGTGACCGTTCAGAAGCCACTGGATCTTAATGGACATGATGAGCTTGTGTATACTGTGGTTGAGGAGGTAACAATAAATGGGGGCACTGAGCAAGGAAAGGCACAAATATTAAGTATTCATGAGTCTCACTCTCTCCAGGCTTTAACACCAGGAAGTCAGTCTGTCAGGATTATCGGCAGCGTAGGTGAAGATCAAACAGCGAGTTTTTATAGTTCCAACTCTAATGCACAAACTTCAGAGCATGAAGCTTCCATGGCCTCATCAGATGCAGCTATTAAAGACacaaaaatcaatgcaaatATTGACAAGGCAGGCGGCCTCATTGATTCGAAAAACCTTCCGCAGCATGATACTTGGTCTGAGGTGCCCCTGACTGAAGATGTGAAGGAGATACCTAAAGGAGCCATGGTTAAACTTAACCCTCCCTGTGAGGTCTCCAAGTCAAAAAAATATGCTTGTGAAATTAAACCTGAACAGAGCTGGTTGTGCCAAAACAACAAGAAAGACTTCAAGGATGTCCCTCAcataaaaactgaacaaaagaaCCCACAGAGTATAAGAGAAACTCCAGAGAAGAAACAGTATACAAAGAAAGATGGTCCAGTAGAATGGACCAAAGACAATATGCCATCAACGTCAACAAGCAGTCCCAATCTCAAAagaaaagagatgaaagaagATTCTGGAATAGCcagaaatgcaattttaaacatGGCTACCGAAACTAAGATGAGCACTAAATCTCATTTTGAGGAGAGCAGCAAGTTGTTTAATGCAAAACTGAAAGCATTATCCGGCAGGAGTCAAACATGGGATCACAGTAAGAGTGGGCGCTCAACGGGAAGCTTGGAAGGTAATTCTAGCTCAAGACTTAAAAGCAAGTTCCTTGAAGAGACTGCTTTCATCGATATGGCTCCAAAAGGCCTTTTAGAGGAAGATTACATTTCAGCACAACCCAGCCCGCTAGGTTTTAAAGAAGACTTTGAGGACTTTGTAAGGTGTCGAGCTAGCCAGAGTCTTGGGAGGGTTCCACAGTTCTTCCCCATGCATGATGCCAATGATCCAACTCGGCCATCAAAAAATATTATCTCGAAGACAACAGCCGttaataaattcatgcccagttcAAAGATCCACAAGATGCCAAACTTGTCTCCCAAACCCACTAGACACTCAATCAACCGGAGCTCAAGCTTTTCTCCGAACGGAGCACCTGTCAGCCAGAGCTCCTGGTCAACACACTCCCTATCCCGAAGTCAAGACAGCGGCAGTTTGAAGTCACCCGGTGCAGTCCGTAAAGGAAGAGTTGAGGCTTTAAGAAGCAGTAGAGACTCTCTTTCTGCTTCTAGTCAAGGTGGATCTGATTTAGATGAATGTGAGGAACTGGGGATGATGAAACCTTTCATTCACACATTGCCATCCCCGTATAGCCGGATCACAGCTCCACGGACTCCACACCACTGCAGTGGCCATGCCAGCGATACCACAAGCGTTCTCAGTGGAGAGTTGCCTCCTGCCATGTGTAAAACGGCTTTGCTCTATAACAGGAGCAGTATGGTCAGTAGTGGCTATGAAAGCATGCTGAGAGACAGTGAAGCTACAATTAGCAGCAGTTCAACGCACAACTCCATTAGCGATCAGAGCTGTTCACTTGGTGCTGCTAAAGGCATGAGAagtaaagggaaaaaaaacaacatagGGTCCAGTCTAAGACGCCCATCTCAAGAAAACTTCATGTCGCTGAAGAAATCCGTCAGCGGGCCAAAAACACACCGGGTGGATCGGGGTGGTTCTGACTCTTATGAAATTAAAGTCTATGAGATTGACAATGTAAATGGTGTACAGAAGAGAGGTGGGGCAGGGAACAAGGGCATAGTCCTCTTTAGTGCAAAGCTGAAATTCTTGGAGCATCGACAGCAGAGAATAGCAGAGGTGAGACTCAGGTATAATGCTCTCAGGCGAGAGTTGGAACATGCCAAGCATCATCTGATGTTGGACCCTGGAAAATGGACCCGCGAATTTGACTTGTGGCAAACGTTTGAGGTAGACTCCCTGGAGCACTTAGAGGCTTTGGAGCAAGTCACTCAACGGCTAGAGCGTCATGTTAACCTCTGTAAAGCACATGTCCTGATGGTCACCAGCTTTGACGTTACACCCAAATGCAGACAAAAGTTACGACATCGGCCCACGATAGATCATCCAGCGTTCGCGGGAATATAGCATGTCAAGATTTTACGTGATCACTTTTACCTGTTGtgcaatatattaaattagCCTATATGCGTGCAAATATACGGAGCGACTACTAGGGGGACATAGTAATCGAAAAAAATGAGATGGGAGGAACGCTTTTGTTGTCTGCTAGTTGGAACACGCTATAATTTGTACTCCCACCTCATTATTTCCATTACAAAGGTTTTACGCGCGAACCCGGAGGAGCGCGAAAACTAGGAAATATACGTACTTTTTCCCTTTCTTCtcgttttatttcttttcatgtcCCTCGAGGAGCTCCGTACAAATCCTCTAACCGTCCTCAAAATCATCAAATTAAAGCTTCCAGCGACGCTGTTCAGACTCTACTTGAAATCGAATTAGCTGTCAGACTTTGTGTTGTTAGCTTTAGCACAGATAAGGTCAAAATAATGGACTGCAGACCGCTGTCTGCGATTGTAAACCCATGGTTTTTAGCgttcaaatgttaatttttcaACGGCACAATTGCAAATCCTGGGTTAATTTCCATATTGCCATATTTACTacgttaacattttaacatcatAGCATGCAGTGAGCATGTGACCTGTAAAATAACTGCTTGTCCATCTGTAAGAATGTTAAACATTATAATGTTTGTTTctcaagtatttattttttaagttgtgCTATCTATTGTTAAATAACTTGCTATACCAATTCTAACAACATATTGTTTCACACAGTAGGCTATATGGCCTGCTTTTGGGATTCATTTCGCAAGTTTAAAccaattattttttcagttactattgtgaaattaaaagtAATGCTTAAGCCAGTTTAAAAGTGGTTTTTATTTGGGGATAAAATTGCCACACTATAAAGCAAGTCAACTTTAAGGTTGTAAAACGCTGCAAAGAATCATTACACCCAGTGTATATTTTGTTGAACTAAAAGCAAATAATTTGCATATCActttactgtaaatgcatttcatcCTTATTGTGTATGTGCTAATAAAAGGTTGTTATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206185 lncRNA downstream 26785 18087212 ~ 18107403 (-) True G139591
XR_006247178.1 lncRNA downstream 226573 17893736 ~ 17907615 (-) True LOC122324448
TU206190 lncRNA downstream 235566 17894002 ~ 17898622 (-) False LOC122324448
TU206130 lncRNA downstream 331992 17801402 ~ 17802196 (-) False swt1
TU206137 lncRNA downstream 334322 17795484 ~ 17799866 (-) False G139567
TU206266 lncRNA upstream 5128 18156801 ~ 18157647 (-) True G139651
TU206271 lncRNA upstream 14453 18166126 ~ 18166731 (-) True G139653
TU206313 lncRNA upstream 104185 18255858 ~ 18290820 (-) False G139681
TU206311 lncRNA upstream 159683 18311356 ~ 18313605 (-) False G139681
TU206315 lncRNA upstream 159683 18311356 ~ 18313605 (-) True G139681
XM_043220333.1 mRNA downstream 960 18123631 ~ 18133228 (-) True cnstb
XM_043220335.1 mRNA downstream 1163 18123631 ~ 18133025 (-) False cnstb
XM_043220334.1 mRNA downstream 2237 18123631 ~ 18131951 (-) False cnstb
XM_043218597.1 mRNA downstream 11052 18116114 ~ 18123136 (-) False sccpdhb
XM_043218596.1 mRNA downstream 11052 18116114 ~ 18123136 (-) True sccpdhb
XM_043220435.1 mRNA upstream 9587 18161260 ~ 18163325 (-) True lft1
XM_043219315.1 mRNA upstream 62897 18214570 ~ 18231055 (-) False fzd3a
XM_043219314.1 mRNA upstream 62897 18214570 ~ 18231055 (-) True fzd3a
XM_043219845.1 mRNA upstream 174254 18325927 ~ 18331052 (-) True pla2g7
XM_043220580.1 mRNA upstream 191790 18343463 ~ 18350122 (-) False adgrf3b
XR_006247229.1 other downstream 309987 17810274 ~ 17824201 (-) False swt1
TU205714 other downstream 706117 17346806 ~ 17428071 (-) True erh
TU205713 other downstream 706117 17425868 ~ 17428071 (-) False erh
TU205287 other downstream 1671972 16455468 ~ 16462216 (-) True G139030
TU205233 other downstream 1767416 16364810 ~ 16366772 (-) False fndc1
XR_006247304.1 other upstream 191799 18343472 ~ 18350122 (-) True adgrf3b
TU206351 other upstream 254354 18406027 ~ 18446949 (-) False G139706
TU206365 other upstream 255081 18406754 ~ 18442292 (-) True G139706
unassigned_transcript_2507 other upstream 924373 19076046 ~ 19076118 (-) True trnaf-gaa_119
TU206720 other upstream 1103137 19254810 ~ 19256255 (-) False batf3

Expression Profile