Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043220442.1 |
| length | 1215 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 7 |
| gene id | psma8 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 10459191 ~ 10462437 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
| GO:0019773 | proteasome core complex, alpha-subunit complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004298 | threonine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K02731 | PSMA7; 20S proteasome subunit alpha 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202991 | lncRNA | downstream | 401 | 10458253 ~ 10458790 (-) | True | G137441 |
| TU202868 | lncRNA | downstream | 181005 | 10277939 ~ 10278186 (-) | True | G137356 |
| TU202860 | lncRNA | downstream | 223885 | 10232024 ~ 10235306 (-) | True | G137348 |
| TU202858 | lncRNA | downstream | 250606 | 10208074 ~ 10208585 (-) | True | G137346 |
| TU202777 | lncRNA | downstream | 707854 | 9697662 ~ 9751337 (-) | False | si:dkey-5n18.1 |
| TU203000 | lncRNA | upstream | 94308 | 10556745 ~ 10562461 (-) | True | G137448 |
| TU203028 | lncRNA | upstream | 147406 | 10609843 ~ 10611455 (-) | True | G137461 |
| TU203030 | lncRNA | upstream | 156498 | 10618935 ~ 10620941 (-) | True | G137462 |
| TU203035 | lncRNA | upstream | 168284 | 10630721 ~ 10631264 (-) | True | G137465 |
| TU203042 | lncRNA | upstream | 171413 | 10633850 ~ 10634771 (-) | True | G137466 |
| XM_043220519.1 | mRNA | downstream | 473287 | 9983522 ~ 9985904 (-) | True | LOC122325472 |
| XM_043218587.1 | mRNA | downstream | 707808 | 9749816 ~ 9751383 (-) | False | si:dkey-5n18.1 |
| XM_043220063.1 | mRNA | downstream | 733775 | 9713267 ~ 9725416 (-) | True | dsg2.1 |
| XM_043220090.1 | mRNA | downstream | 747717 | 9701899 ~ 9711474 (-) | True | zmp:0000001074 |
| XM_043220518.1 | mRNA | downstream | 758653 | 9691124 ~ 9700538 (-) | True | si:ch73-74h11.1 |
| XM_043219413.1 | mRNA | upstream | 15252 | 10477689 ~ 10484360 (-) | True | gpr132b |
| XM_043219411.1 | mRNA | upstream | 22069 | 10484506 ~ 10493235 (-) | True | vipas39 |
| XM_043219416.1 | mRNA | upstream | 31649 | 10494086 ~ 10550573 (-) | False | cdc42bpb |
| XM_043219415.1 | mRNA | upstream | 31649 | 10494086 ~ 10550573 (-) | False | cdc42bpb |
| XM_043219414.1 | mRNA | upstream | 31649 | 10494086 ~ 10550573 (-) | True | cdc42bpb |
| TU202840 | other | downstream | 520314 | 9937965 ~ 9938877 (-) | True | G137330 |
| XR_006247224.1 | other | downstream | 1124130 | 9330137 ~ 9335061 (-) | False | pcsk9 |
| XR_006247226.1 | other | downstream | 1180226 | 9255548 ~ 9278965 (-) | False | bloc1s2 |
| TU203003 | other | upstream | 104860 | 10567297 ~ 10570737 (-) | True | G137451 |
| TU203048 | other | upstream | 259484 | 10721921 ~ 10724069 (-) | True | G137469 |
| unassigned_transcript_2506 | other | upstream | 470125 | 10932562 ~ 10932644 (-) | True | trnal-cag_34 |
| TU203246 | other | upstream | 670189 | 11132626 ~ 11136588 (-) | False | LOC122324412 |
| TU203250 | other | upstream | 712757 | 11175194 ~ 11182169 (-) | False | LOC122325476 |
