Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043220448.1 |
| length | 3494 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | tfap2b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 21414861 ~ 21427140 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0003091 | renal water homeostasis | biological_process |
| GO:0048485 | sympathetic nervous system development | biological_process |
| GO:0097070 | ductus arteriosus closure | biological_process |
| GO:0035810 | positive regulation of urine volume | biological_process |
| GO:0010960 | magnesium ion homeostasis | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0000122 | negative regulation of transcription by RNA polymerase II | biological_process |
| GO:0030510 | regulation of BMP signaling pathway | biological_process |
| GO:0055062 | phosphate ion homeostasis | biological_process |
| GO:0055074 | calcium ion homeostasis | biological_process |
| GO:0055075 | potassium ion homeostasis | biological_process |
| GO:0055078 | sodium ion homeostasis | biological_process |
| GO:0045595 | regulation of cell differentiation | biological_process |
| GO:0035909 | aorta morphogenesis | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0008285 | negative regulation of cell population proliferation | biological_process |
| GO:0042593 | glucose homeostasis | biological_process |
| GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0035136 | forelimb morphogenesis | biological_process |
| GO:0035137 | hindlimb morphogenesis | biological_process |
| GO:0050796 | regulation of insulin secretion | biological_process |
| GO:0072017 | distal tubule development | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0072044 | collecting duct development | biological_process |
| GO:0006006 | glucose metabolic process | biological_process |
| GO:0097275 | cellular ammonium homeostasis | biological_process |
| GO:0043525 | positive regulation of neuron apoptotic process | biological_process |
| GO:0097276 | cellular creatinine homeostasis | biological_process |
| GO:0097277 | cellular urea homeostasis | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K09176 | TFAP2A_B; transcription factor AP-2 alpha/beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207497 | lncRNA | upstream | 388833 | 21027000 ~ 21027469 (+) | True | G140523 |
| TU207478 | lncRNA | upstream | 442733 | 20972578 ~ 20973569 (+) | True | G140506 |
| TU207375 | lncRNA | upstream | 741913 | 20673519 ~ 20674389 (+) | False | LOC122324291 |
| TU207348 | lncRNA | upstream | 782498 | 20632724 ~ 20633804 (+) | True | G140406 |
| TU207311 | lncRNA | upstream | 800089 | 20564340 ~ 20616213 (+) | True | G140381 |
| TU207690 | lncRNA | downstream | 2712 | 21429852 ~ 21430052 (+) | True | G140673 |
| TU207709 | lncRNA | downstream | 7453 | 21434593 ~ 21434796 (+) | True | G140686 |
| TU207743 | lncRNA | downstream | 55487 | 21482627 ~ 21483277 (+) | True | G140708 |
| TU207742 | lncRNA | downstream | 56465 | 21483605 ~ 21488243 (+) | True | G140707 |
| TU207716 | lncRNA | downstream | 89651 | 21516791 ~ 21518976 (+) | True | G140691 |
| XM_043218787.1 | mRNA | upstream | 5653 | 21401025 ~ 21410649 (+) | False | tfap2d |
| XM_043218788.1 | mRNA | upstream | 5653 | 21401282 ~ 21410649 (+) | True | tfap2d |
| XM_043219128.1 | mRNA | upstream | 91528 | 21315465 ~ 21324774 (+) | True | hadhb |
| XM_043219126.1 | mRNA | upstream | 110940 | 21287764 ~ 21305362 (+) | True | gareml |
| XM_043220451.1 | mRNA | upstream | 130057 | 21275650 ~ 21286245 (+) | True | LOC122325408 |
| XM_043218611.1 | mRNA | downstream | 107364 | 21534504 ~ 21550024 (+) | True | LOC122324300 |
| XM_043218612.1 | mRNA | downstream | 107364 | 21534504 ~ 21550024 (+) | False | LOC122324300 |
| XM_043219401.1 | mRNA | downstream | 129625 | 21556765 ~ 21581534 (+) | True | dtnba |
| XM_043219402.1 | mRNA | downstream | 129625 | 21556765 ~ 21581534 (+) | False | dtnba |
| XM_043219404.1 | mRNA | downstream | 138922 | 21566062 ~ 21581534 (+) | False | dtnba |
| XR_006247231.1 | other | upstream | 217683 | 21168775 ~ 21198619 (+) | False | ipo13b |
| XR_006247313.1 | other | upstream | 276504 | 21139684 ~ 21139798 (+) | True | LOC122325571 |
| XR_006247327.1 | other | upstream | 277174 | 21139014 ~ 21139128 (+) | True | LOC122325586 |
| XR_006247312.1 | other | upstream | 278537 | 21137649 ~ 21137765 (+) | True | LOC122325570 |
| XR_006247406.1 | other | upstream | 279449 | 21136739 ~ 21136853 (+) | True | LOC122325673 |
| TU207855 | other | downstream | 417006 | 21844146 ~ 21844701 (+) | True | G140785 |
| XR_006247241.1 | other | downstream | 1044646 | 22471786 ~ 22476774 (+) | False | ubxn2a |
| TU208163 | other | downstream | 1079627 | 22506767 ~ 22517675 (+) | False | fkbp1b |
| unassigned_transcript_2513 | other | downstream | 1673066 | 23100206 ~ 23100288 (+) | True | trnal-cag_35 |
| TU208810 | other | downstream | 2645731 | 24072871 ~ 24074423 (+) | False | G141475 |
