Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043220519.1 |
| length | 850 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC122325472 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 9983522 ~ 9985904 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | molecular_function |
| GO:0050660 | flavin adenine dinucleotide binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202777 | lncRNA | downstream | 232185 | 9697662 ~ 9751337 (-) | False | si:dkey-5n18.1 |
| TU202778 | lncRNA | downstream | 232185 | 9749677 ~ 9751337 (-) | True | si:dkey-5n18.1 |
| TU202821 | lncRNA | downstream | 286188 | 9696283 ~ 9697334 (-) | False | si:ch73-74h11.1 |
| TU202745 | lncRNA | downstream | 447445 | 9459505 ~ 9536077 (-) | False | G137267 |
| TU202742 | lncRNA | downstream | 454986 | 9459505 ~ 9528536 (-) | False | G137267 |
| TU202858 | lncRNA | upstream | 222170 | 10208074 ~ 10208585 (-) | True | G137346 |
| TU202860 | lncRNA | upstream | 246120 | 10232024 ~ 10235306 (-) | True | G137348 |
| TU202868 | lncRNA | upstream | 292035 | 10277939 ~ 10278186 (-) | True | G137356 |
| TU202991 | lncRNA | upstream | 472349 | 10458253 ~ 10458790 (-) | True | G137441 |
| TU203000 | lncRNA | upstream | 570841 | 10556745 ~ 10562461 (-) | True | G137448 |
| XM_043218587.1 | mRNA | downstream | 232139 | 9749816 ~ 9751383 (-) | False | si:dkey-5n18.1 |
| XM_043220063.1 | mRNA | downstream | 258106 | 9713267 ~ 9725416 (-) | True | dsg2.1 |
| XM_043220090.1 | mRNA | downstream | 272048 | 9701899 ~ 9711474 (-) | True | zmp:0000001074 |
| XM_043220518.1 | mRNA | downstream | 282984 | 9691124 ~ 9700538 (-) | True | si:ch73-74h11.1 |
| XM_043220129.1 | mRNA | downstream | 299610 | 9680846 ~ 9683912 (-) | True | ttr |
| XM_043220442.1 | mRNA | upstream | 473287 | 10459191 ~ 10462437 (-) | True | psma8 |
| XM_043219413.1 | mRNA | upstream | 491785 | 10477689 ~ 10484360 (-) | True | gpr132b |
| XM_043219411.1 | mRNA | upstream | 498602 | 10484506 ~ 10493235 (-) | True | vipas39 |
| XM_043219416.1 | mRNA | upstream | 508182 | 10494086 ~ 10550573 (-) | False | cdc42bpb |
| XM_043219415.1 | mRNA | upstream | 508182 | 10494086 ~ 10550573 (-) | False | cdc42bpb |
| TU202840 | other | downstream | 44645 | 9937965 ~ 9938877 (-) | True | G137330 |
| XR_006247224.1 | other | downstream | 648461 | 9330137 ~ 9335061 (-) | False | pcsk9 |
| XR_006247226.1 | other | downstream | 704557 | 9255548 ~ 9278965 (-) | False | bloc1s2 |
| XR_006247225.1 | other | downstream | 704557 | 9265372 ~ 9278965 (-) | False | bloc1s2 |
| XR_006247227.1 | other | downstream | 704557 | 9265372 ~ 9278965 (-) | True | bloc1s2 |
| TU203003 | other | upstream | 581393 | 10567297 ~ 10570737 (-) | True | G137451 |
| TU203048 | other | upstream | 736017 | 10721921 ~ 10724069 (-) | True | G137469 |
| unassigned_transcript_2506 | other | upstream | 946658 | 10932562 ~ 10932644 (-) | True | trnal-cag_34 |
| TU203246 | other | upstream | 1146722 | 11132626 ~ 11136588 (-) | False | LOC122324412 |
| TU203250 | other | upstream | 1189290 | 11175194 ~ 11182169 (-) | False | LOC122325476 |
