RNA id: XR_006247316.1



Basic Information


Item Value
RNA id XR_006247316.1
length 115
RNA type snRNA
GC content 0.46
exon number 1
gene id LOC122325574
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1461683 ~ 1461797 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGCTCGAGTTTCTCTTCATTGTCGCACAAATCTTTCGCCTTTTACTAAAGATTTCCGTGGAGAGGAACCTTTGCGAGTGACTTGTATTTTTTGGGGCTCTGCTCACAGCAGAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU199938 lncRNA downstream 39461 1413803 ~ 1422222 (-) True G135339
TU199918 lncRNA downstream 174374 1287092 ~ 1287309 (-) True G135323
TU199887 lncRNA downstream 223523 1237960 ~ 1238160 (-) True G135297
TU199793 lncRNA downstream 331607 1127292 ~ 1130076 (-) True G135225
TU199862 lncRNA downstream 354579 1106777 ~ 1107104 (-) True G135277
TU199988 lncRNA upstream 91314 1553111 ~ 1555177 (-) True G135365
TU199993 lncRNA upstream 93471 1555268 ~ 1557577 (-) True G135368
TU200020 lncRNA upstream 127666 1589463 ~ 1591235 (-) True G135382
TU200032 lncRNA upstream 147751 1609548 ~ 1610205 (-) True G135384
TU200040 lncRNA upstream 168255 1630052 ~ 1630329 (-) True G135389
XM_043219148.1 mRNA downstream 150028 1293218 ~ 1311655 (-) False tab2
XM_043219147.1 mRNA downstream 150028 1293218 ~ 1311655 (-) False tab2
XM_043219146.1 mRNA downstream 150028 1293218 ~ 1311655 (-) True tab2
XM_043219378.1 mRNA downstream 238668 1169796 ~ 1223015 (-) True lrfn2b
XM_043218923.1 mRNA upstream 96983 1558780 ~ 1571699 (-) False pcmt
XM_043218925.1 mRNA upstream 96983 1558780 ~ 1571698 (-) False pcmt
XM_043219143.1 mRNA upstream 131933 1593730 ~ 1610790 (-) False ankrd6b
XM_043219142.1 mRNA upstream 131933 1593730 ~ 1610789 (-) False ankrd6b
XM_043219139.1 mRNA upstream 131933 1593730 ~ 1610789 (-) False ankrd6b
XR_006247321.1 other downstream 1442 1460126 ~ 1460241 (-) True LOC122325580
unassigned_transcript_2218 other downstream 2026 1459586 ~ 1459657 (-) True trnag-ucc_9
XR_006247346.1 other downstream 2858 1458715 ~ 1458825 (-) True LOC122325607
XR_006247342.1 other downstream 4175 1457393 ~ 1457508 (-) True LOC122325602
unassigned_transcript_2216 other downstream 4758 1456854 ~ 1456925 (-) True trnag-ucc_8
XR_006247339.1 other upstream 1432 1463229 ~ 1463340 (-) True LOC122325599
unassigned_transcript_2219 other upstream 2443 1464240 ~ 1464311 (-) True trnag-ucc_10
XR_006247328.1 other upstream 2978 1464775 ~ 1464888 (-) True LOC122325587
unassigned_transcript_2221 other upstream 3997 1465794 ~ 1465865 (-) True trnag-ucc_11
XR_006247329.1 other upstream 4533 1466330 ~ 1466443 (-) True LOC122325588