RNA id: XR_006247345.1



Basic Information


Item Value
RNA id XR_006247345.1
length 110
RNA type snRNA
GC content 0.46
exon number 1
gene id LOC122325606
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1499378 ~ 1499487 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGCTCGAGTTTTCTTCATTGTCGCACAAATCTTTCGCTTTACTAAAGATTTCCGTGGAGAGGAACCTTTGCGAGTGACCTGTATTTTTGGGGCTCTGCTCACAGCAGAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU199938 lncRNA downstream 77156 1413803 ~ 1422222 (-) True G135339
TU199918 lncRNA downstream 212069 1287092 ~ 1287309 (-) True G135323
TU199887 lncRNA downstream 261218 1237960 ~ 1238160 (-) True G135297
TU199793 lncRNA downstream 369302 1127292 ~ 1130076 (-) True G135225
TU199862 lncRNA downstream 392274 1106777 ~ 1107104 (-) True G135277
TU199988 lncRNA upstream 53624 1553111 ~ 1555177 (-) True G135365
TU199993 lncRNA upstream 55781 1555268 ~ 1557577 (-) True G135368
TU200020 lncRNA upstream 89976 1589463 ~ 1591235 (-) True G135382
TU200032 lncRNA upstream 110061 1609548 ~ 1610205 (-) True G135384
TU200040 lncRNA upstream 130565 1630052 ~ 1630329 (-) True G135389
XM_043219148.1 mRNA downstream 187723 1293218 ~ 1311655 (-) False tab2
XM_043219147.1 mRNA downstream 187723 1293218 ~ 1311655 (-) False tab2
XM_043219146.1 mRNA downstream 187723 1293218 ~ 1311655 (-) True tab2
XM_043219378.1 mRNA downstream 276363 1169796 ~ 1223015 (-) True lrfn2b
XM_043218923.1 mRNA upstream 59293 1558780 ~ 1571699 (-) False pcmt
XM_043218925.1 mRNA upstream 59293 1558780 ~ 1571698 (-) False pcmt
XM_043219143.1 mRNA upstream 94243 1593730 ~ 1610790 (-) False ankrd6b
XM_043219142.1 mRNA upstream 94243 1593730 ~ 1610789 (-) False ankrd6b
XM_043219139.1 mRNA upstream 94243 1593730 ~ 1610789 (-) False ankrd6b
XR_006247348.1 other downstream 1406 1497862 ~ 1497972 (-) True LOC122325609
XR_006247344.1 other downstream 2936 1496331 ~ 1496442 (-) True LOC122325605
XR_006247337.1 other downstream 4463 1494802 ~ 1494915 (-) True LOC122325596
unassigned_transcript_2245 other downstream 5042 1494265 ~ 1494336 (-) True trnag-ucc_26
XR_006247317.1 other downstream 5986 1493278 ~ 1493392 (-) True LOC122325575
XR_006247188.1 other upstream 47000 1546487 ~ 1571698 (-) False pcmt
XR_006247187.1 other upstream 47002 1546489 ~ 1571699 (-) False pcmt
TU199996 other upstream 59295 1558782 ~ 1571551 (-) True pcmt
TU200031 other upstream 156149 1655636 ~ 1660516 (-) False pnrc1
XR_006247211.1 other upstream 354775 1854262 ~ 1876292 (-) False myo6a