RNA id: XR_006247353.1



Basic Information


Item Value
RNA id XR_006247353.1
length 221
RNA type snoRNA
GC content 0.57
exon number 1
gene id LOC122325614
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15920781 ~ 15921001 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ccaacgTGGACATCCTGTGAGATGGCGCTCATGTGGCTCTGTCCTTGTGGCGTAAGGGAGCGCAGCACTTCGGTGCCATGACGTACATTCCCGTTCCACGACGTTGGAAAACAAGCTTGTCCCCGGCCCATGGCTGGTGTGGATGGCGTTCTGTATATTCCTACACCTTCCCAGAGCCCTTTGGGCCGTTACTGGGGAGGTAAACCATGCAGTGCACATGC

Function


GO:

id name namespace
GO:0008144 drug binding molecular_function
GO:0019825 oxygen binding molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU205007 lncRNA downstream 209728 15684176 ~ 15711053 (-) True G138862
TU204996 lncRNA downstream 403711 15516843 ~ 15517070 (-) True G138853
TU204970 lncRNA downstream 539812 15370608 ~ 15380969 (-) True G138828
TU204944 lncRNA downstream 573500 15331801 ~ 15347281 (-) True G138811
TU204946 lncRNA downstream 596501 15323572 ~ 15324280 (-) True G138812
TU205130 lncRNA upstream 71542 15992543 ~ 15993096 (-) False LOC122325494
TU205173 lncRNA upstream 286069 16207070 ~ 16208001 (-) True G138956
TU205179 lncRNA upstream 293343 16214344 ~ 16216716 (-) True G138960
TU205207 lncRNA upstream 402405 16323406 ~ 16325753 (-) True G138983
TU205210 lncRNA upstream 403661 16324662 ~ 16325753 (-) False G138983
XM_043220492.1 mRNA downstream 75304 15842203 ~ 15845477 (-) True LOC122325442
XM_043220182.1 mRNA downstream 398998 15519210 ~ 15521783 (-) True sox11b
XM_043219875.1 mRNA downstream 468770 15438737 ~ 15452011 (-) True rnf144ab
XM_043219877.1 mRNA downstream 468773 15438738 ~ 15452008 (-) False rnf144ab
XM_043218710.1 mRNA downstream 502012 15416967 ~ 15418769 (-) True id2b
XM_043220533.1 mRNA upstream 69148 15990149 ~ 15993645 (-) True LOC122325494
XM_043219006.1 mRNA upstream 72841 15993842 ~ 16001170 (-) True LOC122324513
XM_043219002.1 mRNA upstream 96317 16017318 ~ 16104722 (-) True LOC122324507
XM_043219000.1 mRNA upstream 105758 16026759 ~ 16104727 (-) False LOC122324507
XM_043218999.1 mRNA upstream 105761 16026762 ~ 16104725 (-) False LOC122324507
XR_006247357.1 other downstream 280 15920281 ~ 15920501 (-) True LOC122325618
XR_006247354.1 other downstream 781 15919780 ~ 15920000 (-) True LOC122325615
XR_006247352.1 other downstream 76207 15844354 ~ 15844574 (-) True LOC122325613
XR_006247361.1 other downstream 77152 15843409 ~ 15843629 (-) True LOC122325622
XR_006247356.1 other downstream 77663 15842898 ~ 15843118 (-) True LOC122325617
XR_006247359.1 other upstream 732 15921733 ~ 15921952 (-) True LOC122325620
TU205127 other upstream 69873 15990874 ~ 15993096 (-) False LOC122325494
TU205141 other upstream 107252 16028253 ~ 16036253 (-) False LOC122324507
TU205229 other upstream 441130 16362131 ~ 16363312 (-) False fndc1
TU205232 other upstream 443809 16364810 ~ 16365467 (-) False fndc1

Expression Profile