RNA id: XR_006247356.1



Basic Information


Item Value
RNA id XR_006247356.1
length 221
RNA type snoRNA
GC content 0.57
exon number 1
gene id LOC122325617
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15842898 ~ 15843118 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCAACGTGGACATCCTGTGAGATGGCGCTCATGTGGCTCTGTCCTTGTGGCGTAAGGGAGCGCAGCACTTCGGTGCCATGACGTACATTCCCGTTCCATGACGTTGGATAACAAGCTTGTCCCCGGCCCATGGCTGGTGTGGATGGCGTTCTGTATATTCCTACACCTTCCCAGAGCCCTTTGGGCCATAACTGGGGAGGTAAACCATGCAGTGCACAGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU205007 lncRNA downstream 131845 15684176 ~ 15711053 (-) True G138862
TU204996 lncRNA downstream 325828 15516843 ~ 15517070 (-) True G138853
TU204970 lncRNA downstream 461929 15370608 ~ 15380969 (-) True G138828
TU204944 lncRNA downstream 495617 15331801 ~ 15347281 (-) True G138811
TU204946 lncRNA downstream 518618 15323572 ~ 15324280 (-) True G138812
TU205130 lncRNA upstream 149425 15992543 ~ 15993096 (-) False LOC122325494
TU205173 lncRNA upstream 363952 16207070 ~ 16208001 (-) True G138956
TU205179 lncRNA upstream 371226 16214344 ~ 16216716 (-) True G138960
TU205207 lncRNA upstream 480288 16323406 ~ 16325753 (-) True G138983
TU205210 lncRNA upstream 481544 16324662 ~ 16325753 (-) False G138983
XM_043220182.1 mRNA downstream 321115 15519210 ~ 15521783 (-) True sox11b
XM_043219875.1 mRNA downstream 390887 15438737 ~ 15452011 (-) True rnf144ab
XM_043219877.1 mRNA downstream 390890 15438738 ~ 15452008 (-) False rnf144ab
XM_043218710.1 mRNA downstream 424129 15416967 ~ 15418769 (-) True id2b
XM_043219480.1 mRNA downstream 472870 15365958 ~ 15370028 (-) False e2f6
XM_043219007.1 mRNA upstream 76466 15919584 ~ 15922857 (-) True LOC122324514
XM_043220533.1 mRNA upstream 147031 15990149 ~ 15993645 (-) True LOC122325494
XM_043219006.1 mRNA upstream 150724 15993842 ~ 16001170 (-) True LOC122324513
XM_043219002.1 mRNA upstream 174200 16017318 ~ 16104722 (-) True LOC122324507
XM_043219000.1 mRNA upstream 183641 16026759 ~ 16104727 (-) False LOC122324507
XR_006247350.1 other downstream 280 15842398 ~ 15842618 (-) True LOC122325611
XR_006247351.1 other downstream 118668 15724010 ~ 15724230 (-) True LOC122325612
XR_006247355.1 other downstream 119615 15723063 ~ 15723283 (-) True LOC122325616
XR_006247362.1 other downstream 120129 15722550 ~ 15722769 (-) True LOC122325623
XR_006247360.1 other downstream 120633 15722046 ~ 15722265 (-) True LOC122325621
XR_006247361.1 other upstream 291 15843409 ~ 15843629 (-) True LOC122325622
XR_006247352.1 other upstream 1236 15844354 ~ 15844574 (-) True LOC122325613
XR_006247354.1 other upstream 76662 15919780 ~ 15920000 (-) True LOC122325615
XR_006247357.1 other upstream 77163 15920281 ~ 15920501 (-) True LOC122325618
XR_006247353.1 other upstream 77663 15920781 ~ 15921001 (-) True LOC122325614

Expression Profile