RNA id: XR_006247362.1



Basic Information


Item Value
RNA id XR_006247362.1
length 220
RNA type snoRNA
GC content 0.57
exon number 1
gene id LOC122325623
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15722550 ~ 15722769 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCAACGTGGACATCCTGTGAGATGGCGCTCATGTGGCTCTGTCCTTGTGGCGTAAGTGAGAGCGCAGCGCCGGTGCCATGACGTACATTCCGTTCCATGACGTTGGATAACAAGCTTGTCCCCGGCCCATGGCTGGTGTGGATGGCGTTCTGTATATTCCTACACCTTCCCAGAGCCCTTTGGGCCATAACTGGGGAGGTAAACCATGCAGTGCACAGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU205007 lncRNA downstream 11497 15684176 ~ 15711053 (-) True G138862
TU204996 lncRNA downstream 205480 15516843 ~ 15517070 (-) True G138853
TU204970 lncRNA downstream 341581 15370608 ~ 15380969 (-) True G138828
TU204944 lncRNA downstream 375269 15331801 ~ 15347281 (-) True G138811
TU204946 lncRNA downstream 398270 15323572 ~ 15324280 (-) True G138812
TU205116 lncRNA upstream 94151 15816920 ~ 16190659 (-) True G138922
TU205130 lncRNA upstream 269774 15992543 ~ 15993096 (-) False LOC122325494
TU205173 lncRNA upstream 484301 16207070 ~ 16208001 (-) True G138956
TU205179 lncRNA upstream 491575 16214344 ~ 16216716 (-) True G138960
TU205207 lncRNA upstream 600637 16323406 ~ 16325753 (-) True G138983
XM_043220182.1 mRNA downstream 200767 15519210 ~ 15521783 (-) True sox11b
XM_043219875.1 mRNA downstream 270539 15438737 ~ 15452011 (-) True rnf144ab
XM_043219877.1 mRNA downstream 270542 15438738 ~ 15452008 (-) False rnf144ab
XM_043218710.1 mRNA downstream 303781 15416967 ~ 15418769 (-) True id2b
XM_043219480.1 mRNA downstream 352522 15365958 ~ 15370028 (-) False e2f6
XM_043220492.1 mRNA upstream 119434 15842203 ~ 15845477 (-) True LOC122325442
XM_043219007.1 mRNA upstream 196815 15919584 ~ 15922857 (-) True LOC122324514
XM_043220533.1 mRNA upstream 267380 15990149 ~ 15993645 (-) True LOC122325494
XM_043219006.1 mRNA upstream 271073 15993842 ~ 16001170 (-) True LOC122324513
XM_043219002.1 mRNA upstream 294549 16017318 ~ 16104722 (-) True LOC122324507
XR_006247360.1 other downstream 285 15722046 ~ 15722265 (-) True LOC122325621
XR_006247368.1 other downstream 432140 15290275 ~ 15290410 (-) True LOC122325630
TU204892 other downstream 707367 14993099 ~ 15015183 (-) True srsf5b
TU204893 other downstream 707367 14993099 ~ 15015183 (-) False srsf5b
TU204531 other downstream 1276706 14443592 ~ 14445844 (-) False LOC122324589
XR_006247355.1 other upstream 294 15723063 ~ 15723283 (-) True LOC122325616
XR_006247351.1 other upstream 1241 15724010 ~ 15724230 (-) True LOC122325612
XR_006247350.1 other upstream 119629 15842398 ~ 15842618 (-) True LOC122325611
XR_006247356.1 other upstream 120129 15842898 ~ 15843118 (-) True LOC122325617
XR_006247361.1 other upstream 120640 15843409 ~ 15843629 (-) True LOC122325622