RNA id: XR_006247377.1



Basic Information


Item Value
RNA id XR_006247377.1
length 212
RNA type snoRNA
GC content 0.41
exon number 1
gene id LOC122325639
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2032682 ~ 2032893 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGACTATATTTTCAGGGatcatttctatagttttttgcttggaaatgtgttttgaaagcgtTTGTCTCCCAACCCACGATGATGAGTTGTGATGCTCCTTTCTGAGAGTGAATCAAAGATAGAGCTGTGGCTTTGGTTGCAGGCTCTGTTGTTGATGAACGTTCTTTATTGCTTATAGCAATATAGACGAAAGGGGTGTGGTCCGAGTGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200216 lncRNA downstream 19155 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 154560 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 279735 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 280226 1752156 ~ 1752456 (-) True G135434
TU200089 lncRNA downstream 282879 1749595 ~ 1749803 (-) True G135433
TU200237 lncRNA upstream 67103 2099996 ~ 2100241 (-) True G135542
TU200241 lncRNA upstream 325585 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 544239 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 546376 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 611288 2644181 ~ 2647081 (-) True G135658
XM_043218731.1 mRNA downstream 40503 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 44466 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 67385 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 334771 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 350288 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 433490 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 441978 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 441978 2474871 ~ 2478814 (-) True ndufaf4
XR_006247314.1 other downstream 1030 2031441 ~ 2031652 (-) True LOC122325572
XR_006247383.1 other downstream 2273 2030198 ~ 2030409 (-) True LOC122325646
XR_006247374.1 other downstream 8356 2024117 ~ 2024326 (-) True LOC122325636
XR_006247394.1 other downstream 9595 2022876 ~ 2023087 (-) True LOC122325658
XR_006247402.1 other downstream 10839 2021631 ~ 2021843 (-) True LOC122325666
XR_006247382.1 other upstream 1033 2033926 ~ 2034137 (-) True LOC122325644
XR_006247347.1 other upstream 2277 2035170 ~ 2035381 (-) True LOC122325608
XR_006247391.1 other upstream 3527 2036420 ~ 2036631 (-) True LOC122325655
XR_006247371.1 other upstream 4778 2037671 ~ 2037881 (-) True LOC122325633
XR_006247325.1 other upstream 6020 2038913 ~ 2039124 (-) True LOC122325584