RNA id: XR_006247386.1



Basic Information


Item Value
RNA id XR_006247386.1
length 212
RNA type snoRNA
GC content 0.41
exon number 1
gene id LOC122325649
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2020381 ~ 2020592 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGACTATATTTTCAGGGatcatttctatagttttttgcttggaaatgtgttttgaaagcgtTTGTCTCCCAACCCACGATGATGAGTTTTGATGCTCCTTTCTGAGAGTGAATCAAAGATAGAGCTGTGGCTTTGGTTGCAGGCTCTGTTGTTGATGAACATCCTTTATTGCTTATAGCAATATAGACGAAAGGGGTGTGGTCCGAGTGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200216 lncRNA downstream 6854 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 142259 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 267434 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 267925 1752156 ~ 1752456 (-) True G135434
TU200089 lncRNA downstream 270578 1749595 ~ 1749803 (-) True G135433
TU200237 lncRNA upstream 79404 2099996 ~ 2100241 (-) True G135542
TU200241 lncRNA upstream 337886 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 556540 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 558677 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 623589 2644181 ~ 2647081 (-) True G135658
XM_043218731.1 mRNA downstream 28202 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 32165 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 55084 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 347072 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 362589 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 445791 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 454279 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 454279 2474871 ~ 2478814 (-) True ndufaf4
TU200217 other downstream 11419 2005549 ~ 2008962 (-) False G135527
XR_006247211.1 other downstream 144089 1854262 ~ 1876292 (-) False myo6a
TU200031 other downstream 359865 1655636 ~ 1660516 (-) False pnrc1
XR_006247187.1 other downstream 448682 1546489 ~ 1571699 (-) False pcmt
XR_006247188.1 other downstream 448683 1546487 ~ 1571698 (-) False pcmt
XR_006247402.1 other upstream 1039 2021631 ~ 2021843 (-) True LOC122325666
XR_006247394.1 other upstream 2284 2022876 ~ 2023087 (-) True LOC122325658
XR_006247374.1 other upstream 3525 2024117 ~ 2024326 (-) True LOC122325636
XR_006247383.1 other upstream 9606 2030198 ~ 2030409 (-) True LOC122325646
XR_006247314.1 other upstream 10849 2031441 ~ 2031652 (-) True LOC122325572

Expression Profile