RNA id: unassigned_transcript_2274



Basic Information


Item Value
RNA id unassigned_transcript_2274
length 72
RNA type tRNA
GC content 0.61
exon number 1
gene id trnap-ugg_21
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2092233 ~ 2092304 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGCTCGTTGGTCTAAGGGtgtgattctcgctttgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200216 lncRNA downstream 78706 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 214111 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 339286 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 339777 1752156 ~ 1752456 (-) True G135434
TU200089 lncRNA downstream 342430 1749595 ~ 1749803 (-) True G135433
TU200237 lncRNA upstream 7692 2099996 ~ 2100241 (-) True G135542
TU200241 lncRNA upstream 266174 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 484828 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 486965 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 551877 2644181 ~ 2647081 (-) True G135658
XM_043218731.1 mRNA downstream 100054 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 104017 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 126936 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 275360 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 290877 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 374079 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 382567 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 382567 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2273 other downstream 83 2092077 ~ 2092150 (-) True trnai-aau_79
unassigned_transcript_2272 other downstream 243 2091918 ~ 2091990 (-) True trnaf-gaa_88
unassigned_transcript_2271 other downstream 406 2091756 ~ 2091827 (-) True trnaq-cug_29
unassigned_transcript_2270 other downstream 1299 2090863 ~ 2090934 (-) True trnap-ugg_20
unassigned_transcript_2269 other downstream 1468 2090693 ~ 2090765 (-) True trnai-aau_78
unassigned_transcript_2275 other upstream 823 2093127 ~ 2093198 (-) True trnaq-cug_30
unassigned_transcript_2276 other upstream 985 2093289 ~ 2093361 (-) True trnaf-gaa_89
unassigned_transcript_2277 other upstream 1137 2093441 ~ 2093514 (-) True trnai-aau_80
unassigned_transcript_2278 other upstream 1293 2093597 ~ 2093668 (-) True trnap-ugg_22
unassigned_transcript_2279 other upstream 2187 2094491 ~ 2094562 (-) True trnaq-cug_31