RNA id: unassigned_transcript_2283



Basic Information


Item Value
RNA id unassigned_transcript_2283
length 72
RNA type tRNA
GC content 0.50
exon number 1
gene id trnaq-cug_32
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2095859 ~ 2095930 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggttccatggtgtaatggttagcacattggactctgaatccagcgatccgagttcaaatctcggtgggagCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200216 lncRNA downstream 82332 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 217737 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 342912 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 343403 1752156 ~ 1752456 (-) True G135434
TU200089 lncRNA downstream 346056 1749595 ~ 1749803 (-) True G135433
TU200237 lncRNA upstream 4066 2099996 ~ 2100241 (-) True G135542
TU200241 lncRNA upstream 262548 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 481202 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 483339 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 548251 2644181 ~ 2647081 (-) True G135658
XM_043218731.1 mRNA downstream 103680 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 107643 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 130562 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 271734 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 287251 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 370453 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 378941 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 378941 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2282 other downstream 823 2094965 ~ 2095036 (-) True trnap-ugg_23
unassigned_transcript_2281 other downstream 977 2094809 ~ 2094882 (-) True trnai-aau_81
unassigned_transcript_2280 other downstream 1134 2094653 ~ 2094725 (-) True trnaf-gaa_90
unassigned_transcript_2279 other downstream 1297 2094491 ~ 2094562 (-) True trnaq-cug_31
unassigned_transcript_2278 other downstream 2191 2093597 ~ 2093668 (-) True trnap-ugg_22
unassigned_transcript_2284 other upstream 90 2096020 ~ 2096092 (-) True trnaf-gaa_91
unassigned_transcript_2285 other upstream 248 2096178 ~ 2096251 (-) True trnai-aau_82
unassigned_transcript_2286 other upstream 404 2096334 ~ 2096405 (-) True trnap-ugg_24
unassigned_transcript_2287 other upstream 1460 2097390 ~ 2097462 (-) True trnaf-gaa_92
unassigned_transcript_2288 other upstream 1617 2097547 ~ 2097620 (-) True trnai-aau_83