RNA id: unassigned_transcript_2289



Basic Information


Item Value
RNA id unassigned_transcript_2289
length 72
RNA type tRNA
GC content 0.49
exon number 1
gene id trnaq-cug_33
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2110209 ~ 2110280 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggttccatggtgtaatggttagcactttggactctgaatccagcgatccgagttcaaatttcggtgggacct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200237 lncRNA downstream 9968 2099996 ~ 2100241 (-) True G135542
TU200216 lncRNA downstream 96682 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 232087 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 357262 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 357753 1752156 ~ 1752456 (-) True G135434
TU200241 lncRNA upstream 248198 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 466852 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 468989 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 533901 2644181 ~ 2647081 (-) True G135658
TU200419 lncRNA upstream 622323 2732603 ~ 2737889 (-) True G135674
XM_043218731.1 mRNA downstream 118030 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 121993 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 144912 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 257384 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 272901 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 356103 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 364591 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 364591 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2288 other downstream 12589 2097547 ~ 2097620 (-) True trnai-aau_83
unassigned_transcript_2287 other downstream 12747 2097390 ~ 2097462 (-) True trnaf-gaa_92
unassigned_transcript_2286 other downstream 13804 2096334 ~ 2096405 (-) True trnap-ugg_24
unassigned_transcript_2285 other downstream 13958 2096178 ~ 2096251 (-) True trnai-aau_82
unassigned_transcript_2284 other downstream 14117 2096020 ~ 2096092 (-) True trnaf-gaa_91
unassigned_transcript_2290 other upstream 91 2110371 ~ 2110443 (-) True trnaf-gaa_93
unassigned_transcript_2291 other upstream 250 2110530 ~ 2110603 (-) True trnai-aau_84
unassigned_transcript_2292 other upstream 406 2110686 ~ 2110757 (-) True trnap-ugg_25
unassigned_transcript_2293 other upstream 1300 2111580 ~ 2111651 (-) True trnaq-cug_34
unassigned_transcript_2294 other upstream 1462 2111742 ~ 2111814 (-) True trnaf-gaa_94