RNA id: unassigned_transcript_2294



Basic Information


Item Value
RNA id unassigned_transcript_2294
length 73
RNA type tRNA
GC content 0.55
exon number 1
gene id trnaf-gaa_94
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2111742 ~ 2111814 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggctcgatcccgggtttcggca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200237 lncRNA downstream 11501 2099996 ~ 2100241 (-) True G135542
TU200216 lncRNA downstream 98215 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 233620 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 358795 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 359286 1752156 ~ 1752456 (-) True G135434
TU200241 lncRNA upstream 246664 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 465318 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 467455 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 532367 2644181 ~ 2647081 (-) True G135658
TU200419 lncRNA upstream 620789 2732603 ~ 2737889 (-) True G135674
XM_043218731.1 mRNA downstream 119563 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 123526 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 146445 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 255850 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 271367 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 354569 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 363057 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 363057 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2293 other downstream 91 2111580 ~ 2111651 (-) True trnaq-cug_34
unassigned_transcript_2292 other downstream 985 2110686 ~ 2110757 (-) True trnap-ugg_25
unassigned_transcript_2291 other downstream 1139 2110530 ~ 2110603 (-) True trnai-aau_84
unassigned_transcript_2290 other downstream 1299 2110371 ~ 2110443 (-) True trnaf-gaa_93
unassigned_transcript_2289 other downstream 1462 2110209 ~ 2110280 (-) True trnaq-cug_33
unassigned_transcript_2295 other upstream 85 2111899 ~ 2111972 (-) True trnai-aau_85
unassigned_transcript_2296 other upstream 241 2112055 ~ 2112126 (-) True trnap-ugg_26
unassigned_transcript_2297 other upstream 1135 2112949 ~ 2113020 (-) True trnaq-cug_35
unassigned_transcript_2298 other upstream 1299 2113113 ~ 2113185 (-) True trnaf-gaa_95
unassigned_transcript_2299 other upstream 1455 2113269 ~ 2113340 (-) True trnai-aau_86