RNA id: unassigned_transcript_2301



Basic Information


Item Value
RNA id unassigned_transcript_2301
length 72
RNA type tRNA
GC content 0.50
exon number 1
gene id trnaq-cug_36
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2114314 ~ 2114385 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggttccatggtgtaatggttagcactttggactctgaatccagcgatccgagttcaaatctcggtgggacct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200237 lncRNA downstream 14073 2099996 ~ 2100241 (-) True G135542
TU200216 lncRNA downstream 100787 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 236192 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 361367 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 361858 1752156 ~ 1752456 (-) True G135434
TU200241 lncRNA upstream 244093 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 462747 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 464884 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 529796 2644181 ~ 2647081 (-) True G135658
TU200419 lncRNA upstream 618218 2732603 ~ 2737889 (-) True G135674
XM_043218731.1 mRNA downstream 122135 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 126098 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 149017 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 253279 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 268796 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 351998 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 360486 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 360486 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2300 other downstream 820 2113423 ~ 2113494 (-) True trnap-ugg_27
unassigned_transcript_2299 other downstream 974 2113269 ~ 2113340 (-) True trnai-aau_86
unassigned_transcript_2298 other downstream 1129 2113113 ~ 2113185 (-) True trnaf-gaa_95
unassigned_transcript_2297 other downstream 1294 2112949 ~ 2113020 (-) True trnaq-cug_35
unassigned_transcript_2296 other downstream 2188 2112055 ~ 2112126 (-) True trnap-ugg_26
unassigned_transcript_2302 other upstream 90 2114475 ~ 2114547 (-) True trnaf-gaa_96
unassigned_transcript_2303 other upstream 247 2114632 ~ 2114705 (-) True trnai-aau_87
unassigned_transcript_2304 other upstream 403 2114788 ~ 2114859 (-) True trnap-ugg_28
unassigned_transcript_2305 other upstream 1454 2115839 ~ 2115911 (-) True trnaf-gaa_97
unassigned_transcript_2306 other upstream 1611 2115996 ~ 2116069 (-) True trnai-aau_88