RNA id: unassigned_transcript_2304



Basic Information


Item Value
RNA id unassigned_transcript_2304
length 72
RNA type tRNA
GC content 0.61
exon number 1
gene id trnap-ugg_28
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2114788 ~ 2114859 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggctcgttggtctaggggtatgattctcgctttgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200237 lncRNA downstream 14547 2099996 ~ 2100241 (-) True G135542
TU200216 lncRNA downstream 101261 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 236666 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 361841 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 362332 1752156 ~ 1752456 (-) True G135434
TU200241 lncRNA upstream 243619 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 462273 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 464410 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 529322 2644181 ~ 2647081 (-) True G135658
TU200419 lncRNA upstream 617744 2732603 ~ 2737889 (-) True G135674
XM_043218731.1 mRNA downstream 122609 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 126572 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 149491 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 252805 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 268322 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 351524 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 360012 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 360012 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2303 other downstream 83 2114632 ~ 2114705 (-) True trnai-aau_87
unassigned_transcript_2302 other downstream 241 2114475 ~ 2114547 (-) True trnaf-gaa_96
unassigned_transcript_2301 other downstream 403 2114314 ~ 2114385 (-) True trnaq-cug_36
unassigned_transcript_2300 other downstream 1294 2113423 ~ 2113494 (-) True trnap-ugg_27
unassigned_transcript_2299 other downstream 1448 2113269 ~ 2113340 (-) True trnai-aau_86
unassigned_transcript_2305 other upstream 980 2115839 ~ 2115911 (-) True trnaf-gaa_97
unassigned_transcript_2306 other upstream 1137 2115996 ~ 2116069 (-) True trnai-aau_88
unassigned_transcript_2307 other upstream 1293 2116152 ~ 2116222 (-) True trnap-ugg_29
unassigned_transcript_2308 other upstream 2187 2117046 ~ 2117117 (-) True trnaq-cug_37
unassigned_transcript_2309 other upstream 2502 2117361 ~ 2117433 (-) True trnai-aau_89