RNA id: unassigned_transcript_2311



Basic Information


Item Value
RNA id unassigned_transcript_2311
length 72
RNA type tRNA
GC content 0.50
exon number 1
gene id trnaq-cug_38
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2118410 ~ 2118481 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggttccatggtgtaatggttagcactttggactctgaatccagcgatccgagttcaaatctcggtgggacct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200237 lncRNA downstream 18169 2099996 ~ 2100241 (-) True G135542
TU200216 lncRNA downstream 104883 2005549 ~ 2013527 (-) True G135527
TU200155 lncRNA downstream 240288 1877914 ~ 1878122 (-) True G135480
TU200091 lncRNA downstream 365463 1752733 ~ 1752947 (-) True G135435
TU200090 lncRNA downstream 365954 1752156 ~ 1752456 (-) True G135434
TU200241 lncRNA upstream 239997 2358478 ~ 2358691 (-) True G135546
TU200345 lncRNA upstream 458651 2577132 ~ 2577488 (-) True G135627
TU200347 lncRNA upstream 460788 2579269 ~ 2579702 (-) True G135629
TU200382 lncRNA upstream 525700 2644181 ~ 2647081 (-) True G135658
TU200419 lncRNA upstream 614122 2732603 ~ 2737889 (-) True G135674
XM_043218731.1 mRNA downstream 126231 1989485 ~ 1992179 (-) True si:dkey-121j17.6
XM_043218779.1 mRNA downstream 130194 1976324 ~ 1988216 (-) True smyd2b
XM_043220216.1 mRNA downstream 153113 1934537 ~ 1965297 (-) False kcnk2b
XM_043218927.1 mRNA upstream 249183 2367664 ~ 2378853 (-) True frk
XM_043218926.1 mRNA upstream 264700 2383181 ~ 2388664 (-) True col10a1b
XM_043218692.1 mRNA upstream 347902 2466383 ~ 2473993 (-) True gpr63
XM_043218646.1 mRNA upstream 356390 2474871 ~ 2478814 (-) False ndufaf4
XM_043218645.1 mRNA upstream 356390 2474871 ~ 2478814 (-) True ndufaf4
unassigned_transcript_2310 other downstream 824 2117516 ~ 2117586 (-) True trnap-ugg_30
unassigned_transcript_2309 other downstream 977 2117361 ~ 2117433 (-) True trnai-aau_89
unassigned_transcript_2308 other downstream 1293 2117046 ~ 2117117 (-) True trnaq-cug_37
unassigned_transcript_2307 other downstream 2188 2116152 ~ 2116222 (-) True trnap-ugg_29
unassigned_transcript_2306 other downstream 2341 2115996 ~ 2116069 (-) True trnai-aau_88
unassigned_transcript_2312 other upstream 91 2118572 ~ 2118644 (-) True trnaf-gaa_98
unassigned_transcript_2313 other upstream 249 2118730 ~ 2118803 (-) True trnai-aau_90
unassigned_transcript_2314 other upstream 405 2118886 ~ 2118957 (-) True trnap-ugg_31
unassigned_transcript_2315 other upstream 1302 2119783 ~ 2119854 (-) True trnaq-cug_39
unassigned_transcript_2316 other upstream 1617 2120098 ~ 2120171 (-) True trnai-aau_91