RNA id: unassigned_transcript_2468



Basic Information


Item Value
RNA id unassigned_transcript_2468
length 84
RNA type tRNA
GC content 0.54
exon number 2
gene id trnal-caa_23
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5569468 ~ 5569579 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201152 lncRNA downstream 449702 5112173 ~ 5119766 (-) True G136188
TU201141 lncRNA downstream 472407 5091300 ~ 5097061 (-) True G136180
TU201134 lncRNA downstream 535664 5033599 ~ 5033804 (-) True G136176
TU201132 lncRNA downstream 550602 5018361 ~ 5018866 (-) True G136175
TU201129 lncRNA downstream 550754 5018361 ~ 5018714 (-) False G136175
TU201376 lncRNA upstream 82720 5652299 ~ 5652925 (-) True G136350
TU201394 lncRNA upstream 131602 5701181 ~ 5701475 (-) True G136356
TU201429 lncRNA upstream 290374 5859953 ~ 5860623 (-) True G136368
TU201458 lncRNA upstream 479389 6048968 ~ 6050633 (-) True G136388
TU201487 lncRNA upstream 558919 6128498 ~ 6145661 (-) True G136398
XM_043219879.1 mRNA downstream 32092 5520146 ~ 5537376 (-) True tagapb
XM_043219878.1 mRNA downstream 44299 5520146 ~ 5525169 (-) False tagapb
XM_043220024.1 mRNA downstream 55428 5504256 ~ 5514040 (-) True rsph3
XM_043220023.1 mRNA downstream 55428 5504257 ~ 5514040 (-) False rsph3
XM_043218907.1 mRNA downstream 67184 5479674 ~ 5502284 (-) False LOC122324477
XM_043219520.1 mRNA upstream 21762 5591341 ~ 5598666 (-) True LOC122324832
XM_043219395.1 mRNA upstream 54621 5624200 ~ 5646907 (-) True LOC122324749
XM_043219396.1 mRNA upstream 54621 5624200 ~ 5636252 (-) False LOC122324749
XM_043219523.1 mRNA upstream 119804 5689383 ~ 5696894 (-) True LOC122324836
XM_043219152.1 mRNA upstream 319902 5889481 ~ 5893291 (-) False si:ch211-22i13.2
unassigned_transcript_2467 other downstream 1280 5568077 ~ 5568188 (-) True trnal-caa_22
unassigned_transcript_2466 other downstream 1651 5567706 ~ 5567817 (-) True trnal-caa_21
unassigned_transcript_2465 other downstream 3059 5566298 ~ 5566409 (-) True trnal-caa_20
unassigned_transcript_2464 other downstream 5522 5563836 ~ 5563946 (-) True trnal-caa_19
unassigned_transcript_2463 other downstream 8890 5560467 ~ 5560578 (-) True trnal-caa_18
unassigned_transcript_2469 other upstream 268 5569847 ~ 5569958 (-) True trnal-caa_24
unassigned_transcript_2470 other upstream 774 5570353 ~ 5570464 (-) True trnal-caa_25
unassigned_transcript_2471 other upstream 2158 5571737 ~ 5571847 (-) True trnal-caa_26
unassigned_transcript_2472 other upstream 3130 5572709 ~ 5572820 (-) True trnal-caa_27
unassigned_transcript_2473 other upstream 4650 5574229 ~ 5574339 (-) True trnal-caa_28