RNA id: unassigned_transcript_2476



Basic Information


Item Value
RNA id unassigned_transcript_2476
length 84
RNA type tRNA
GC content 0.54
exon number 2
gene id trnal-caa_31
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5576218 ~ 5576329 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201152 lncRNA downstream 456452 5112173 ~ 5119766 (-) True G136188
TU201141 lncRNA downstream 479157 5091300 ~ 5097061 (-) True G136180
TU201134 lncRNA downstream 542414 5033599 ~ 5033804 (-) True G136176
TU201132 lncRNA downstream 557352 5018361 ~ 5018866 (-) True G136175
TU201129 lncRNA downstream 557504 5018361 ~ 5018714 (-) False G136175
TU201376 lncRNA upstream 75970 5652299 ~ 5652925 (-) True G136350
TU201394 lncRNA upstream 124852 5701181 ~ 5701475 (-) True G136356
TU201429 lncRNA upstream 283624 5859953 ~ 5860623 (-) True G136368
TU201458 lncRNA upstream 472639 6048968 ~ 6050633 (-) True G136388
TU201487 lncRNA upstream 552169 6128498 ~ 6145661 (-) True G136398
XM_043219879.1 mRNA downstream 38842 5520146 ~ 5537376 (-) True tagapb
XM_043219878.1 mRNA downstream 51049 5520146 ~ 5525169 (-) False tagapb
XM_043220024.1 mRNA downstream 62178 5504256 ~ 5514040 (-) True rsph3
XM_043220023.1 mRNA downstream 62178 5504257 ~ 5514040 (-) False rsph3
XM_043218907.1 mRNA downstream 73934 5479674 ~ 5502284 (-) False LOC122324477
XM_043219520.1 mRNA upstream 15012 5591341 ~ 5598666 (-) True LOC122324832
XM_043219395.1 mRNA upstream 47871 5624200 ~ 5646907 (-) True LOC122324749
XM_043219396.1 mRNA upstream 47871 5624200 ~ 5636252 (-) False LOC122324749
XM_043219523.1 mRNA upstream 113054 5689383 ~ 5696894 (-) True LOC122324836
XM_043219152.1 mRNA upstream 313152 5889481 ~ 5893291 (-) False si:ch211-22i13.2
unassigned_transcript_2475 other downstream 396 5575711 ~ 5575822 (-) True trnal-caa_30
unassigned_transcript_2474 other downstream 1373 5574734 ~ 5574845 (-) True trnal-caa_29
unassigned_transcript_2473 other downstream 1879 5574229 ~ 5574339 (-) True trnal-caa_28
unassigned_transcript_2472 other downstream 3398 5572709 ~ 5572820 (-) True trnal-caa_27
unassigned_transcript_2471 other downstream 4371 5571737 ~ 5571847 (-) True trnal-caa_26
unassigned_transcript_2477 other upstream 4412 5580741 ~ 5580852 (-) True trnal-caa_32
unassigned_transcript_2478 other upstream 6948 5583277 ~ 5583388 (-) True trnal-caa_33
unassigned_transcript_2479 other upstream 7961 5584290 ~ 5584401 (-) True trnal-caa_34
unassigned_transcript_2480 other upstream 9483 5585812 ~ 5585923 (-) True trnal-caa_35
TU201363 other upstream 15009 5591338 ~ 5598426 (-) False LOC122324832