RNA id: unassigned_transcript_2498



Basic Information


Item Value
RNA id unassigned_transcript_2498
length 84
RNA type tRNA
GC content 0.51
exon number 2
gene id trnal-uaa_35
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5821537 ~ 5821648 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtcagaatggctgagtggtctaaggcgccagacttaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201394 lncRNA downstream 120062 5701181 ~ 5701475 (-) True G136356
TU201376 lncRNA downstream 168612 5652299 ~ 5652925 (-) True G136350
TU201152 lncRNA downstream 701771 5112173 ~ 5119766 (-) True G136188
TU201141 lncRNA downstream 724476 5091300 ~ 5097061 (-) True G136180
TU201134 lncRNA downstream 787733 5033599 ~ 5033804 (-) True G136176
TU201429 lncRNA upstream 38305 5859953 ~ 5860623 (-) True G136368
TU201458 lncRNA upstream 227320 6048968 ~ 6050633 (-) True G136388
TU201487 lncRNA upstream 306850 6128498 ~ 6145661 (-) True G136398
TU201506 lncRNA upstream 383442 6205090 ~ 6205438 (-) True G136416
TU201549 lncRNA upstream 424615 6246263 ~ 6246891 (-) True G136440
XM_043219523.1 mRNA downstream 124643 5689383 ~ 5696894 (-) True LOC122324836
XM_043219395.1 mRNA downstream 174630 5624200 ~ 5646907 (-) True LOC122324749
XM_043219396.1 mRNA downstream 185285 5624200 ~ 5636252 (-) False LOC122324749
XM_043219520.1 mRNA downstream 222871 5591341 ~ 5598666 (-) True LOC122324832
XM_043219878.1 mRNA downstream 296368 5520146 ~ 5525169 (-) False tagapb
XM_043219152.1 mRNA upstream 67833 5889481 ~ 5893291 (-) False si:ch211-22i13.2
XM_043219151.1 mRNA upstream 67833 5889481 ~ 5893291 (-) True si:ch211-22i13.2
XM_043219149.1 mRNA upstream 71784 5893432 ~ 5904235 (-) True rhag
XM_043219362.1 mRNA upstream 102418 5924066 ~ 5931122 (-) False zpax2
XM_043219361.1 mRNA upstream 102418 5924066 ~ 5931122 (-) True zpax2
unassigned_transcript_2497 other downstream 396 5821030 ~ 5821141 (-) True trnal-caa_46
unassigned_transcript_2496 other downstream 902 5820524 ~ 5820635 (-) True trnal-caa_45
unassigned_transcript_2495 other downstream 3435 5817991 ~ 5818102 (-) True trnal-caa_44
unassigned_transcript_2494 other downstream 3945 5817482 ~ 5817592 (-) True trnal-uaa_34
unassigned_transcript_2493 other downstream 5476 5815950 ~ 5816061 (-) True trnal-caa_43
unassigned_transcript_2499 other upstream 909 5822557 ~ 5822668 (-) True trnal-caa_47
unassigned_transcript_2500 other upstream 1416 5823064 ~ 5823175 (-) True trnal-caa_48
unassigned_transcript_2501 other upstream 2432 5824080 ~ 5824191 (-) True trnal-caa_49
unassigned_transcript_2502 other upstream 2940 5824588 ~ 5824699 (-) True trnal-caa_50
unassigned_transcript_2503 other upstream 3956 5825604 ~ 5825715 (-) True trnal-caa_51