RNA id: unassigned_transcript_2507



Basic Information


Item Value
RNA id unassigned_transcript_2507
length 73
RNA type tRNA
GC content 0.53
exon number 1
gene id trnaf-gaa_119
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 19076046 ~ 19076118 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gccgaaatagctcagttgggagagcgttagactgaagatctaaaggtccctggttcgatcccggGTTTCGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206615 lncRNA downstream 32132 19040790 ~ 19043914 (-) True G139871
TU206550 lncRNA downstream 246247 18824880 ~ 18829799 (-) True G139823
TU206519 lncRNA downstream 405113 18669438 ~ 18670933 (-) True G139801
TU206504 lncRNA downstream 441380 18627307 ~ 18634666 (-) True G139798
TU206496 lncRNA downstream 477134 18598694 ~ 18598912 (-) True G139790
TU206658 lncRNA upstream 83720 19159838 ~ 19160157 (-) True G139903
TU206702 lncRNA upstream 148262 19224380 ~ 19250790 (-) True G139940
TU206741 lncRNA upstream 222151 19298269 ~ 19300293 (-) False angel2
TU206999 lncRNA upstream 258961 19335079 ~ 19341060 (-) True G140152
TU207027 lncRNA upstream 369710 19445828 ~ 19448712 (-) True G140175
XM_043218876.1 mRNA downstream 65867 19000843 ~ 19010179 (-) True nmbr
XM_043220516.1 mRNA downstream 202037 18871665 ~ 18874009 (-) True cited2
XM_043219883.1 mRNA downstream 212010 18846395 ~ 18864036 (-) False txlnba
XM_043219881.1 mRNA downstream 212010 18846395 ~ 18864036 (-) True txlnba
XM_043219882.1 mRNA downstream 212010 18846395 ~ 18864036 (-) False txlnba
XM_043220434.1 mRNA upstream 6427 19082545 ~ 19087185 (-) True si:ch211-202p1.5
XM_043220378.1 mRNA upstream 20161 19096279 ~ 19166008 (-) True hivep2a
XM_043220376.1 mRNA upstream 20161 19096279 ~ 19162787 (-) False hivep2a
XM_043220377.1 mRNA upstream 20161 19096279 ~ 19137484 (-) False hivep2a
XM_043220380.1 mRNA upstream 20161 19096279 ~ 19137481 (-) False hivep2a
TU206351 other downstream 629097 18406027 ~ 18446949 (-) False G139706
TU206365 other downstream 633754 18406754 ~ 18442292 (-) True G139706
XR_006247304.1 other downstream 725924 18343472 ~ 18350122 (-) True adgrf3b
XR_006247229.1 other downstream 1251845 17810274 ~ 17824201 (-) False swt1
TU205714 other downstream 1647975 17346806 ~ 17428071 (-) True erh
TU206720 other upstream 178692 19254810 ~ 19256255 (-) False batf3
TU206721 other upstream 185348 19261466 ~ 19262878 (-) True LOC122324949
TU206746 other upstream 224258 19300376 ~ 19302848 (-) False angel2
TU206747 other upstream 224258 19300376 ~ 19303968 (-) False angel2
XR_006247245.1 other upstream 525414 19601532 ~ 19615202 (-) False trim54