RNA id: TU210850


Basic Information

Item Value
RNA id TU210850
length 1252
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G142729
representative True

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 431624 ~ 434122 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttttaatttaaatctcaTACATAAAGCAGTAAGAATTCATattatctctctttttaaaGAGGGTTTTAAAGCAAAGATTCACAGAGAATAATTTATACACATATTAGAAGGATATACAGtccataatttataataatctCCTTGGCCTCAACATACccacattaacacattaatataACACGCACATGAAAAACATCACTGTTTTAACATTACAGATGTCAAATTCGACGCTAATGCTGATCAGAATTGGTACTGAGTCTGGTGtattatcttaaaatatgtatCTCATTAAATACGATTGGACTGTAATACATTCATAAGGTAAAAGAGCGTTGACGTTTCAGCACAACACTATCATCGGGATATCAAACTCCGCTGGACATTTGCAGGTTTATTTGTGTGCATCTGAATGCATGTAGACGTGCTTTCGGAATAAAGACATAACCGGCACACACATCTGTAAAATATACGGGATAAAACTcgtttttaaacatattaaaatatatccgTTTGGTCCTTTAATTTATTATGCTACATGTACACTGACTAAACTGAAGATAGAGAGTTGCTGTCAGCGAGGGGTGAGAAAATTGCGAATGGAAGAACGATTGCTGCTGGTTTCAATGTCGCTGTCTCCGGAGCCCACTTCATTACCTGTCGcacaataataatcaataacaTATTTTGCATGACACTTCGATCAAAAAGCGTGTTTTGAATCGTTTTTTCGAGGGCTTCGGTAAACTCTAAACTCACCTTCACTTGAGTGAGATTTCAGCATGGCCATTTTAGCCAGGAATTTAAAGGAGAGACAAGCACCTGTTTCCCTGTCGCACAGTCCTCCTGCTTTACAGTTGCACGTTTTCCGACATTCCATGCCGTACGTTCCATACATGCAGTCTTGTAGAAGTCGCAGAAGAGTCCCGGTCCGCACTTGACGCCGTGCATCCCGGACACGGTGCGGTAGCAGTGCTCTCCCCGTCCCGCGGCGCAGAGCTGGCAGCATCCGCAGTCGTCCAGCACCGTGCGCCTGCAGCGCTGCGTCGAGCCGCACAGCGCGGGGCTGCATCTGTCCGGGCAGCTGACGGCGTATTTACCCGCGGGACCCCACGCGTCGGCGTCTCCGAGCGCCATCAGCAGCAACACCGGGATCGCGTACGAACGCATGGCTTGAAGTGCGAACGAACACCACGCTGGACGCTGTCCTCGGGTCTAGCGCGCTGGGGAGGAGCTGTCCCCTTCTTAGACGAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210760 lncRNA upstream 228449 202787 ~ 203175 (+) True G142672
TU210740 lncRNA upstream 235422 182416 ~ 196202 (+) True G142658
XR_006247457.1 lncRNA upstream 251575 172944 ~ 180049 (+) True LOC122326263
TU210959 lncRNA downstream 292136 726258 ~ 726592 (+) True G142807
TU210980 lncRNA downstream 301600 735722 ~ 806106 (+) False alpk2
TU210993 lncRNA downstream 325153 759275 ~ 812057 (+) True G142832
TU211038 lncRNA downstream 482499 916621 ~ 916963 (+) True G142866
XR_006247435.1 lncRNA downstream 614256 1048378 ~ 1050268 (+) False LOC122326171
XM_043221565.1 mRNA upstream 107864 263512 ~ 323760 (+) False mapk10
XM_043221563.1 mRNA upstream 107864 263513 ~ 323760 (+) False mapk10
XM_043221568.1 mRNA upstream 107864 263514 ~ 323760 (+) False mapk10
XM_043221562.1 mRNA upstream 107864 263514 ~ 323760 (+) False mapk10
XM_043221564.1 mRNA upstream 107864 263514 ~ 323760 (+) False mapk10
XM_043221008.1 mRNA downstream 3652 437774 ~ 495164 (+) True LOC122326268
XM_043222066.1 mRNA downstream 242744 676866 ~ 723059 (+) True ccbe1
XM_043222081.1 mRNA downstream 296670 730792 ~ 742946 (+) True lman1
XM_043221828.1 mRNA downstream 312120 746242 ~ 750644 (+) True cplx4a
XM_043221955.1 mRNA downstream 318698 752820 ~ 755652 (+) True rx3
XR_006247444.1 other downstream 616716 1050838 ~ 1055347 (+) False entpd2b
TU211153 other downstream 718987 1153109 ~ 1156142 (+) False glrx
TU211154 other downstream 718987 1153109 ~ 1156142 (+) False glrx
TU211224 other downstream 793891 1228013 ~ 1229045 (+) False LOC122326311
TU211695 other downstream 1799537 2233659 ~ 2237195 (+) True G143321

Expression Profile