Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211478 |
| length | 678 |
| lncRNA type | read_through |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G143149 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056719.1 |
| NCBI id | CM032088.1 |
| chromosome length | 19199999 |
| location | 1839332 ~ 1963020 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0032400 | melanosome localization | biological_process |
| GO:0051875 | pigment granule localization | biological_process |
| GO:0043473 | pigmentation | biological_process |
| GO:0033059 | cellular pigmentation | biological_process |
| GO:0051640 | organelle localization | biological_process |
| GO:0051648 | vesicle localization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211472 | lncRNA | upstream | 74237 | 1764761 ~ 1765095 (+) | True | G143144 |
| TU211466 | lncRNA | upstream | 75589 | 1763476 ~ 1763743 (+) | True | G143140 |
| TU211465 | lncRNA | upstream | 76495 | 1762382 ~ 1762837 (+) | True | G143139 |
| TU211223 | lncRNA | upstream | 592523 | 1241871 ~ 1246809 (+) | True | G142977 |
| TU211157 | lncRNA | upstream | 603177 | 1229548 ~ 1236155 (+) | True | G142943 |
| XR_006247411.1 | lncRNA | downstream | 18903 | 1981923 ~ 1984090 (+) | True | LOC122326018 |
| TU211536 | lncRNA | downstream | 88612 | 2051632 ~ 2056679 (+) | False | stxbp1a |
| TU211662 | lncRNA | downstream | 109154 | 2072174 ~ 2072661 (+) | True | G143290 |
| TU211689 | lncRNA | downstream | 218052 | 2181072 ~ 2181602 (+) | True | G143315 |
| TU211714 | lncRNA | downstream | 372239 | 2335259 ~ 2335791 (+) | True | G143339 |
| XM_043221408.1 | mRNA | upstream | 9180 | 1809407 ~ 1830152 (+) | False | LOC122326489 |
| XM_043221407.1 | mRNA | upstream | 9180 | 1809494 ~ 1830152 (+) | False | LOC122326489 |
| XM_043221411.1 | mRNA | upstream | 9180 | 1809497 ~ 1830152 (+) | False | LOC122326489 |
| XM_043221409.1 | mRNA | upstream | 9180 | 1809900 ~ 1830152 (+) | True | LOC122326489 |
| XM_043221410.1 | mRNA | upstream | 9180 | 1813558 ~ 1830152 (+) | False | LOC122326489 |
| XM_043222176.1 | mRNA | downstream | 32767 | 1995787 ~ 1999047 (+) | True | slc31a2 |
| XM_043221760.1 | mRNA | downstream | 67084 | 2030104 ~ 2056673 (+) | True | stxbp1a |
| XM_043222159.1 | mRNA | downstream | 317561 | 2280581 ~ 2287288 (+) | True | LOC122326937 |
| XM_043221537.1 | mRNA | downstream | 655215 | 2618235 ~ 2627353 (+) | True | LOC122326565 |
| XM_043221535.1 | mRNA | downstream | 657144 | 2620164 ~ 2627353 (+) | False | LOC122326565 |
| TU211224 | other | upstream | 610287 | 1228013 ~ 1229045 (+) | False | LOC122326311 |
| TU211153 | other | upstream | 683190 | 1153109 ~ 1156142 (+) | False | glrx |
| TU211154 | other | upstream | 683190 | 1153109 ~ 1156142 (+) | False | glrx |
| XR_006247444.1 | other | upstream | 783985 | 1050838 ~ 1055347 (+) | False | entpd2b |
| TU211695 | other | downstream | 270639 | 2233659 ~ 2237195 (+) | True | G143321 |
| unassigned_transcript_2518 | other | downstream | 983832 | 2946852 ~ 2946923 (+) | True | trnaa-ugc_120 |
| TU212076 | other | downstream | 1352736 | 3315756 ~ 3317895 (+) | False | LOC122326950 |
| TU212079 | other | downstream | 1355215 | 3318235 ~ 3319879 (+) | False | LOC122326950 |
| unassigned_transcript_2519 | other | downstream | 1652140 | 3615160 ~ 3615231 (+) | True | trnam-cau_115 |
