RNA id: XM_043220937.1


Basic Information

Item Value
RNA id XM_043220937.1
length 2148
RNA type mRNA
GC content 0.41
exon number 8
gene id entpd2b
representative False

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1050838 ~ 1055925 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCACATTTTAAACAGATGATAGAAGAAGATTTAGGAATTTTCGGAACACTCCCTTTTTCTACAAAGAAAGGTTTTAAATAGTGTAGGACATTGTGTTTCTATTAACTATATTAGACAACAATTATTACAACAACAATTATTCTACACCTGTCTGTGTAGACTATTTCCGAATCgtgttttgtaataatttatcatGTGCACCTGCAAAATTGATGTTTGTTATTATTCTAAAGAAACGGTTACTAGCCGGGCTTCTTTTTACAAAAGAAGTCTGTTCTCCTCTGAAGGAACTGGGTGGGCGGAGGGGGTTGCCCCTGTTCCTTCACCATCAATTGCGCCAGGCAAACCCCAACTTTACTAATGGATAAACCGTTTGTTAAGTTTGTTGTCTCGGCGGCACTCTTTCTGTTTGGAATTGTGTCTATTGTACTCcttacagtatttataaatgaaatgagaGAGCCACCACAGTACATGTATGGGGTTGTGCTGGATGCTGGATCCTCACACACTGCCTTGTACATCTACAGATGGCCGGCTGACAAATTAAATGGCACAGGCGTTGTCACCCAGCACAGCGAGTGTCATGTCAGAGGAGGGGGAATCTCTAGTTATGCTGGGCAGCTGGATGCTGCGGCCCGTAGCCTCGAGGCATGCTTGAAACAAGCCATGCGTGACATTCCCCCAGAAAGACATCACCACACCCCTGTGTATCTAGGAGCTACTGCTGGCATGAGACTTTTGAAaattacCAATCCTGGCAAAGCATCTCAGATTCTTCaagaagtaaaacaaaaaatcaaatCCTTTCCTTTCAACTTTCGAGGAGCAGTAATTTTGAGCGGTCAAGAAGAGGGGGTTTACGGTTGGGTCACAGTCAACTACCTTCTCGAAAACTTCATAAAGttgcagGGTAATTCTACCAAAGTGTACCATCCCTGCTACCCATCTGACTTCACTGATGTCTTCAAGCTGGAGCAAGTGTTTGACTCGCCTTGTACAGCATCTAAGAGACCCAAACCTTACAACCCTCATTCCTGGATCAGGGTGCAAGGCACCGGGGACTACCAAAGCTGCCTTGGCAACACTTCTAATATATTTTCCTTCCAGTTCTGCCCCTTTTCTAAGTGTTCGTTTAATGGAGTTTTCCAGCCCAACATCAGCGGGGGCTTCATGGCATTTTCTGCTTATTTCTTCACTCACAGTTATCTCCAGCAAAGTACAGGAATAAACATCAGAACCTCTGCTCAGCTAGAGGAGGCTACCCAAGCTGTGTGCAATATGACCATAAAAGagATGACAGAGAAAGCTCCGTACTTGAAAAAATACCTGAAGGATTACTGTGCTGTCGCGGTGTATATACAAGTGCTACTGCTTAGGGGTTATAACTTTGATGAGAGTTCTTTCCAAAACGTTGCTTTTCAGAAAAAGGCAGGCGAGGCGTCTGTGGGCTGGGCTCTGGGTTATATTCTCAGTGTGAGCAGCCTTCTTCCAGAGGAACCTGCGGGCATCAGGAAGGGCTTGCGTCCTGCTGCATGGATTGGCTTGTTGATTCTCCTAACCGTCCTCCTCACTTCTACCTTCTGTTACATGGCTCTCCTAGTGATTCGGAGGAAAATGAGTAATGAAGGAGTCTCATAGCGCACTGCTATGCATACAGTTGTTCAATGTGTTCAATACTGTACTGTCTATGCTAATACTACATCAAATTTAACAggaaaattgtttgttttatctaaACATATGCACCTTaggaaattaaatgaatgaggCACAAAATGAATAAcactaaataatattatatacgGTATACTATGGTATGTCCAATACCAGCGCTGTTCTATTGTGCAATAGATATTGTTCACTCTTTTAACAGATTTCAGAAAATGTCTTTGCCTTGTGTGATACACTAATCaactttattaaagaaaatatatgtaatttgaCTGATGTCAGTGACCCACAACTGTAGCTTTGTATCTCTTTGGCCAATTCACATTTGTATTCAGTTGATGtacaatgcaatacaaatatttcGTAGACCGCAGGAATAAAactataatgttaataatttacgAAGTTGGATTGATTTCTGATGCAGGTCACTAAAGAATgtacatgcaaaataaactacaatgtgtttaacaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247435.1 lncRNA upstream 570 1048378 ~ 1050268 (+) False LOC122326171
TU211139 lncRNA upstream 613 1048521 ~ 1050225 (+) False LOC122326171
TU211038 lncRNA upstream 133875 916621 ~ 916963 (+) True G142866
TU210993 lncRNA upstream 238781 759275 ~ 812057 (+) True G142832
TU210980 lncRNA upstream 244732 735722 ~ 806106 (+) False alpk2
TU211143 lncRNA downstream 14436 1070361 ~ 1081301 (+) False LOC122326171
TU211152 lncRNA downstream 16343 1072268 ~ 1074041 (+) True G142941
TU211142 lncRNA downstream 22047 1077972 ~ 1081301 (+) True LOC122326171
TU211144 lncRNA downstream 26242 1082167 ~ 1083273 (+) True G142933
TU211177 lncRNA downstream 34318 1090243 ~ 1102107 (+) True G142954
XM_043221212.1 mRNA upstream 2827 1023624 ~ 1048011 (+) False grin1a
XM_043221221.1 mRNA upstream 2827 1023624 ~ 1048011 (+) True grin1a
XM_043221216.1 mRNA upstream 2827 1023625 ~ 1048011 (+) False grin1a
XM_043221213.1 mRNA upstream 2827 1023625 ~ 1048011 (+) False grin1a
XM_043221214.1 mRNA upstream 2827 1023625 ~ 1048011 (+) False grin1a
XM_043220748.1 mRNA downstream 406 1056331 ~ 1063140 (+) True zmat1
XM_043220927.1 mRNA downstream 8917 1064842 ~ 1068363 (+) True cd8b
XM_043220861.1 mRNA downstream 18324 1074249 ~ 1077136 (+) True cd8a
XM_043222107.1 mRNA downstream 60666 1116591 ~ 1131625 (+) True pcsk1
XM_043221532.1 mRNA downstream 83320 1139245 ~ 1152504 (+) True ell2
TU211153 other downstream 97184 1153109 ~ 1156142 (+) False glrx
TU211154 other downstream 97184 1153109 ~ 1156142 (+) False glrx
TU211224 other downstream 172088 1228013 ~ 1229045 (+) False LOC122326311
TU211695 other downstream 1177734 2233659 ~ 2237195 (+) True G143321
unassigned_transcript_2518 other downstream 1890927 2946852 ~ 2946923 (+) True trnaa-ugc_120

Expression Profile