RNA id: XM_043220949.1


Basic Information

Item Value
RNA id XM_043220949.1
length 879
RNA type mRNA
GC content 0.39
exon number 5
gene id ddias
representative False

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 6607753 ~ 6610753 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GATAAACCAACGAGGAAGAGATTCGTGCTCGGTTTGAAACTCAAATTTTGtagctcacttttttttttgtgtttctggtctttttcatttcactttctTTATAAgtgtatgcatttaatatattgcagtgtaaaaaatattttaaaggtaaTTTAACACTCGagtcctaatttttttttaccatttcctTATAGAGAATAGTAGTATTATGGTCATTGTTTTTAAACCTTGCCAGTATTTTAAGCACTCATGAGCAACACACGGGCTCTGGTGAGTTGCACTATACTTTCTCTGCAAGACACTTGCTTTGTGTATCCATGTTGCAAATGCTGTCTATCCAGATTAATTCAGGAAAGCAAAAGGGCTATATGCGGAAAATGTGGATTCACTTGTGACTTACAAAACGTGGACTACAGATACAGGTTGTCATTTAAAGTGTCCAGAAAGCAAGATATATTTGGCGTGACAGTTTTCGGGGGCTGTTTAAACCCCTTTTTTGGCATTACTGCTGGTGGCCTTCAAagATGTATTGATTTGGAGAAAACTGAAGGCACACATACTGTTCAACAACTGCTTGTCAAAGCCGTGGAAGACTGCTTTATTGGAAGATGTGTCATTTTTGGATTGAAGGTACCTCATAATGTTGGCACTTCTTCACTGTCTGGACAGTTAGTGGCCTGCCAGATCATTTCTCCATTATCGGTCCATCACAACAGAAACACTCACAATGTTCTCAAAGAAATGAACTAAGTTTTGGTTATACCCCTCCGTCGTGTGCAAAGTTGGATTCTCAACCCAGCAGTGAAGGATTCACACTCTCAAGCGCATGGCAATCACCTGGGTTATGTTTCCCTCCAGAAGAATTAAGTAACGATGTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU213277 lncRNA upstream 407 6606847 ~ 6607346 (+) True G144348
TU213276 lncRNA upstream 1723 6605481 ~ 6606030 (+) True G144347
TU213267 lncRNA upstream 22939 6582930 ~ 6584814 (+) False cfap300
TU213228 lncRNA upstream 70612 6497701 ~ 6537141 (+) True G144317
TU213290 lncRNA downstream 13480 6622464 ~ 6623576 (+) True G144353
TU213282 lncRNA downstream 28139 6637123 ~ 7018763 (+) True G144351
TU213327 lncRNA downstream 87725 6696709 ~ 7085923 (+) True G144370
TU213321 lncRNA downstream 90008 6698992 ~ 6736633 (+) True G144367
TU213331 lncRNA downstream 93918 6702902 ~ 6705037 (+) True G144371
XM_043220823.1 mRNA upstream 13791 6585713 ~ 6593962 (+) False birc2
XM_043220997.1 mRNA downstream 2019 6611003 ~ 6620143 (+) True pcf11
XM_043222173.1 mRNA downstream 15947 6624931 ~ 6628770 (+) True alg8
XM_043222211.1 mRNA downstream 106021 6715005 ~ 6720847 (+) True htr3b
XM_043221901.1 mRNA downstream 113182 6722166 ~ 6727215 (+) True htr3a
XM_043221902.1 mRNA downstream 113182 6722166 ~ 6727215 (+) False htr3a
TU213247 other upstream 71959 6534100 ~ 6535794 (+) True G144330
XR_006247541.1 other upstream 682226 5925466 ~ 5925527 (+) True LOC122327007
XR_006247543.1 other upstream 683392 5924289 ~ 5924361 (+) True LOC122327009
XR_006247546.1 other upstream 684258 5923420 ~ 5923495 (+) True LOC122327012
TU212962 other upstream 758700 5847941 ~ 5849053 (+) True G144152
TU213575 other downstream 1298480 7907464 ~ 7908923 (+) True anapc13
TU213572 other downstream 1299071 7908055 ~ 7908923 (+) False anapc13
TU213573 other downstream 1299071 7908055 ~ 7908923 (+) False anapc13
TU213574 other downstream 1299071 7908055 ~ 7909027 (+) False anapc13
TU213648 other downstream 1598819 8207803 ~ 8211125 (+) True LOC122326775

Expression Profile