RNA id: XM_043221923.1


Basic Information

Item Value
RNA id XM_043221923.1
length 2927
RNA type mRNA
GC content 0.45
exon number 15
gene id oacyl
representative True

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 779285 ~ 786532 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGCCACTGTGAAATACAGCGATGCGATTGGTGCGTTCATGTTGACGAGGGTGGCAGTGactttaaatttgtaattaatcattGTAAATCTGAGGCTTTTATGGTGGCGGATGTTAGAGAAAATCCTTGTAATTTGTAAATCCTTGTAAATTTTCCTTGTAAAAAGTGCTAAAACGTGTTAAAAGTGAGTCTTTCTCTTGtcaaatatttctctttatcAGACTCAGTGGACCTCAATTAGGTTTCAATGAAATATCATCTTCGTTTCGATTGAAATGGACAATTGTtgacataaaaatgcaataagtaTAGCACAGATAATTCGGTATATATGTATAGTTCTGATCGGAGCATAGACCTGATCATGACCGCATTCACATGTTGTTGAGTTGTTCATTGGCCTCTCTGTGGTGAAAGGTTTGAGTGTGTGATGAAAAGACAATCATCTGAGCGTGGCGTTTTGATTTCCACGGTCATTTTGGATGGTGGGAGAGTGACAGGTCACATGTCCAACTCTGATGTGTCCTGCTTTCGCCATATTTAAACGAGTCAAACACCTAAAATGAAACGCTGTATAAGATGGTACGCTTAACATGGAGTGCTGTTACTCTGATGTACCTGTTGGTTTGGCACCCCGCATGTGCCTGGAACGTGTCTGTTAACTGCAAGGAGGACACAACGGCGTTCCTTGGGGAATTACAGAAAGATACTCCAAGCAAATATGCGGTCTTGATGTACGATGCATTTGGTAAGATTGGCAGCGATGTTGAAGGAGGGAACGTGAACAGACCCGGGTCTCTGAGAGAGTGTCTGTCTGTGGAGGGCCCTGAGTTCATGGGACAGTACTGCCAGGTCTTCCTCAAACAGGACAGTGTGGAGTATTTTGTGGGTGTTTGCGTTCCTGACTCTTGTACAGAATCAGAAGTCCAGACACTAGTAGTTTATGGTGCATTTGATCAGAAACCAATCTCTTTACTTCCCTCTGTGCCTTCAATCTTAATGTCGGATTCCACGCTCGGCGTCTTCATGACTCAGTGCCTCAGTGATTCCCCTCATGTAGACCCGTCTGCCGTAGTCTGCCTGTTTGTGTGCTGTGCGTTATTGGCGCTTCCTCTCGTAGCTTCCATCTGTGTGGCGGTAATAAAGAGGAAGCGGATGAGAGAGGTGAGACCAGGGCTGGGTCTTGCTCATACCTCAAACACCAGCCAATACGGCGCTCTCTTGGCTAAcggctcagccaatcagagtaAAGAGAGCAATGCTTCCCCGGATACCACACAGAGGAGAGACCAAAATGCCGAAAAAGACCAGCAGAGCATCTCAAAAaCTGTGTTATCCTGCCTCCAGGCGCTCTCAGTACAGACTAACAGTCAGGGGTTGCTCACCACAGAAAGCTCTGGAAGCAGTTATTCGTCTCTGAATGGCATCCGTATTCTTAGCTTGCTGTGGATCATCTCAGGCCACACCGTGCAGCTCAGCGCTTGGAGTAACCTGGACAATGATAAGAGGTGGAAGGAAATGGTGGAGAGGAACCCTCTGTATATTTTTGCCTTCAGTGGGCCGGTGTATCTAGCGGTTGACTCTTTTCTGCTGCTGGGTGGTCTTCTGAGTGCTAAATCTCTGCTGAGCTCCATCCAGAGGTCAGACAACACGCTTAGCTTCAGTCTGGTGGCTCATTTCCTCTTCAAGCGCTTCAAGCGGATTCAGCCTCTCCACCTCTTCATCGTGTGCCTGACcattggactcttctccatcgTTCAGAGAGGGGTCTTCTGGTTCATAGCCGAAGACGAGGTCTACAGCTGTAAGAAATACTGGTGGTCTAATCTGCTCCTCGTCAACAACCTCTTCACCATCACAGATATTtgcgcACCCTGGACATGGTATCTCTCCATCGACTTCCAGTTCTATGCAACAACACCTTTTCTAATATTCCTGTACAGAATAAACAAACGCGTGCTTGTCGTCGTGTCGGTTATTCTCCTAATGATCTCCAGTGTAACAGGAGCCCTGATCACCAGTTTGCTGCATCTCCCTGTGCACCAGCCAACAACGCTGGCGTATGAAAGCTATTTTCAGTATTACTACAACAAACCCTACACAAGATATGGGCCGTATCTACTGGGCGTTCTTGCTGGAATATACATGACCACCAAGAAAGAGACACTGATAAAGCGACAGTGGCAGGCGGTCGTGGGTTGGCTCTGCTCGCTGTCAGTCATGGCGCTCTTAGTGGGATTGGCCTACGTGCTGAGAGACGTCCCGCCCTATCCGTCCCTAACCCGTGCCGTTTATCAGGGGACACACCGCTCGCTTTGGGCCCTGGCTTTGGTCTGGATCATCCTGGCCTGCGAGGAAGGATGCGGAGGGTTTGTGGATAAAATTCTGTCTTTAAGCCTGTGGGCTCCTCTGTCTAACATCAGCTTTGCCTGTTATCTGATCCACCCAATcattattatactgtacaacGGCAAACAAGAGACAACCATGCACTATTCAGACTTCAACTTTTTCTACCTGTTTCTGGGTCACCTGCTGTTGACAGTCTCTGTAGGTTATGTGTTAACTGTACTAATCGAAAAGCCATATCTCTTCCTGCCAAAACGATAAGTTCTGCTTCATTACCTCAAGACTAGAAGGTGAAGAGCcgatttaaatatgtttatgtatttaggAGAAAGTAGAAGATTTGAGTGCAggatatttattcattatttgtcccctattttctaattttatttactttgaaaGCTGTAGATTGTTGTTTATGAACTGGGTTAGATAGctttagtgttgtttttttggaatgcattaaataaatgattttaaataaatgatacagaATTAACAAATTAATGTTATACTGTATTTTGTCATATTGTGAAAACGGTGTATTGTGACGGTATCGGATGGTAACCCCATGCTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210959 lncRNA upstream 52693 726258 ~ 726592 (+) True G142807
TU210850 lncRNA upstream 345163 431624 ~ 434122 (+) True G142729
TU210760 lncRNA upstream 576110 202787 ~ 203175 (+) True G142672
TU210740 lncRNA upstream 583083 182416 ~ 196202 (+) True G142658
XR_006247457.1 lncRNA upstream 599236 172944 ~ 180049 (+) True LOC122326263
TU211038 lncRNA downstream 130089 916621 ~ 916963 (+) True G142866
XR_006247435.1 lncRNA downstream 261846 1048378 ~ 1050268 (+) False LOC122326171
TU211139 lncRNA downstream 261989 1048521 ~ 1050225 (+) False LOC122326171
TU211141 lncRNA downstream 261989 1048521 ~ 1081301 (+) False LOC122326171
TU211143 lncRNA downstream 283829 1070361 ~ 1081301 (+) False LOC122326171
XM_043221919.1 mRNA upstream 142 762646 ~ 779143 (+) False znf532
XM_043221917.1 mRNA upstream 142 763635 ~ 779143 (+) False znf532
XM_043221921.1 mRNA upstream 142 766193 ~ 779143 (+) False znf532
XM_043221920.1 mRNA upstream 142 766400 ~ 779143 (+) False znf532
XM_043221916.1 mRNA upstream 142 766400 ~ 779143 (+) False znf532
XM_043221343.1 mRNA downstream 6503 793035 ~ 805935 (+) True alpk2
XM_043221060.1 mRNA downstream 91697 878229 ~ 901350 (+) True prlra
XM_043221057.1 mRNA downstream 115141 901673 ~ 915039 (+) True agxt2
XM_043221966.1 mRNA downstream 139826 926358 ~ 935922 (+) False LOC122326806
XM_043221965.1 mRNA downstream 139828 926360 ~ 939559 (+) True LOC122326806
XR_006247444.1 other downstream 264306 1050838 ~ 1055347 (+) False entpd2b
TU211153 other downstream 366577 1153109 ~ 1156142 (+) False glrx
TU211154 other downstream 366577 1153109 ~ 1156142 (+) False glrx
TU211224 other downstream 441481 1228013 ~ 1229045 (+) False LOC122326311
TU211695 other downstream 1447127 2233659 ~ 2237195 (+) True G143321

Expression Profile