RNA id: XM_043222167.1


Basic Information

Item Value
RNA id XM_043222167.1
length 747
RNA type mRNA
GC content 0.48
exon number 3
gene id LOC122326942
representative True

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 88162 ~ 90237 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGGCCCGGGTCATAGAAGCTTCCATAGAGCAGCACTATGGCTCACGGCTGGGGTTCTTACATAATCCCCCGCATGAGGCCGGCCCTGTCAGACAGAGTTACATCTGCATCCAGGAGCTCAAACCTGCAATTCTGCTACTCATTTACACACTGGGAGCTGACAATTGCATGATGTGTGTGTCCGTCCTTCTCCATCAATTGCTCAGTTCGGAAGAAGAGTCCTGGTCGTTCCAAACATCTATTAAAGACAATGCAGTCTACGAGCTTCttcagatgtCCGCCATTCAGACGCCTGCAAATTTTAAGAAGCCAACCGACTTTAAACCCCAAAATCAAAAAGTGCGTAACGAACAGAtccgattttttttctttgtttctcctTTAGCGGCTTCGCTGCCCACCTTCCAAGCAACGCCGTCTGTTATTTACGCCAAAATCAACGGCTCGGAAGCGATGTCCTGTGAATGTCCAAATCACGCCTGCCAGGAGGTTTTTTGGTACCGATACCTCGAGAGGACGAAGACTCTTCAGTTCCTCGTGTTTGTCAACAGCGCTGGCAGAGAGCAATATGGAAAAAACCTGAACGGCACTCGGTTCAAGGGGTCGTTGTCCGGAGGAAACAGGCTGGGCTATACCCTGCGTGTAACAGGACTACAGGAGGATGATATCGGCCTTTATTCCTGcatgtttaaaactaaaaatactatGCCTGTCGGATATTACATAATGCCTGGAGTGAATCCTCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247457.1 lncRNA downstream 82707 172944 ~ 180049 (+) True LOC122326263
TU210740 lncRNA downstream 92179 182416 ~ 196202 (+) True G142658
TU210760 lncRNA downstream 112550 202787 ~ 203175 (+) True G142672
TU210850 lncRNA downstream 341387 431624 ~ 434122 (+) True G142729
TU210959 lncRNA downstream 636021 726258 ~ 726592 (+) True G142807
XM_043221565.1 mRNA downstream 173275 263512 ~ 323760 (+) False mapk10
XM_043221563.1 mRNA downstream 173276 263513 ~ 323760 (+) False mapk10
XM_043221568.1 mRNA downstream 173277 263514 ~ 323760 (+) False mapk10
XM_043221562.1 mRNA downstream 173277 263514 ~ 323760 (+) False mapk10
XM_043221564.1 mRNA downstream 173277 263514 ~ 323760 (+) False mapk10
XR_006247444.1 other downstream 960601 1050838 ~ 1055347 (+) False entpd2b
TU211153 other downstream 1062872 1153109 ~ 1156142 (+) False glrx
TU211154 other downstream 1062872 1153109 ~ 1156142 (+) False glrx
TU211224 other downstream 1137776 1228013 ~ 1229045 (+) False LOC122326311
TU211695 other downstream 2143422 2233659 ~ 2237195 (+) True G143321

Expression Profile