RNA id: TU218753


Basic Information

Item Value
RNA id TU218753
length 684
lncRNA type inter_gene
GC content 0.48
exon number 4
gene id G148038
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 260426 ~ 305251 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attacaaaatactgaaaataactTTCATTTATCGACACCCTTCCAGACTTACCAGTGAGCATGAACTGGTAGGCGTTATCAGAGATGGAGAAGATGTGAGCATGAACTGGTAGGCGTTATCAGAGATGGAGAAGATGTGAGGTGGGGCTTCAATCCTCTTTTTCCCTCTGTATCCAGCCACGACAATTGCGTCGTACACCGGCAGCCACTTGTAGGGATTGACAGTGACGCAGAACAAGCCAGAGTAGGTCTGAAACAGAGATAGTCCAGGTTTACAATGCTGCCGTCTCATcctagaaataaaacacaatttacttAGACTTACGTAGATCATCCATGCTGCGTAACGCTCTTTGAGGTTGTACAGCACACAAGGCTCATTGAGGTGGGTCATCATGGCCATGTCCTCGATTTTGTCAAACTTGGGAGGATTCATGGGGTGGATGTCCTCTTCTTTTACCGTGATTGTTTCCCACACAGAGTTTTGACAGTAGCTTTGCCGCCCTCTCTGCCAGTAAGAGTACCCTTCAGGTACATCTGTTCTGGCTCTGCCACAAAGAACGCCGTTTTGGCATCAAAGGGGGTGTTCTGAGCCtcaattctctctctttctgtcttccgGAGGTAAATGGCCGCCGGGCCGAAACACTCCATTTCACCATCTCCCATGATGGCAGTTCACTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218495 lncRNA downstream 78810 181069 ~ 181616 (-) True G147867
TU218472 lncRNA downstream 171573 28530 ~ 88853 (-) True G147846
XR_006247732.1 lncRNA downstream 200910 58226 ~ 59516 (-) True LOC122327881
TU218471 lncRNA downstream 232538 25952 ~ 27888 (-) True G147845
TU218469 lncRNA downstream 236811 23149 ~ 23615 (-) True G147843
TU218792 lncRNA upstream 64367 357281 ~ 435408 (-) True G148054
TU218791 lncRNA upstream 65163 358077 ~ 437316 (-) True G148053
XR_006247741.1 lncRNA upstream 82584 375498 ~ 376262 (-) False LOC122328030
TU218788 lncRNA upstream 86265 379179 ~ 395690 (-) True G148050
TU218808 lncRNA upstream 94682 387596 ~ 424396 (-) True G148067
XM_043223459.1 mRNA downstream 136159 122594 ~ 124267 (-) True LOC122327827
XM_043223749.1 mRNA upstream 152583 445497 ~ 448008 (-) True LOC122328026
XM_043223670.1 mRNA upstream 160937 453851 ~ 459470 (-) True LOC122327957
XM_043223725.1 mRNA upstream 176531 469445 ~ 472125 (-) True ndufaf3
XM_043223568.1 mRNA upstream 202334 495248 ~ 514839 (-) True si:ch1073-335m2.2
XM_043223822.1 mRNA upstream 222779 515693 ~ 524814 (-) True fblim1
TU218764 other upstream 61998 354912 ~ 432599 (-) True G148042
TU218805 other upstream 82356 375270 ~ 376493 (-) True LOC122328030
TU218830 other upstream 297147 590061 ~ 592136 (-) False tmem240b
TU218879 other upstream 374590 667504 ~ 671420 (-) True G148116
TU218891 other upstream 382880 675794 ~ 679897 (-) False G148119

Expression Profile