RNA id: TU218755


Basic Information

Item Value
RNA id TU218755
length 931
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G148038
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 260426 ~ 305251 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTACTTTAGTTGTGTACTGCCAAAAAAgccattctttctttttttggttttgtttctaGCCTAAATATATAAGAATTCTTTTAGTATGTTTTAGACAAATCAAAATTTTTGCAGGAATTGTTAGATATTTTGCCTggaaacatgtaaataaattctaagcttaaaaaaaacaaaactttttttttaagtgtgtgcACACTTTCAGACTCCTCTTACCAGTGAGCATGAACTGGTAGGCGTTATCAGAGATGGAGAAGATGTGAGGTGGGGCTTCAATCCTCTTTTTCCCTCTGTATCCAGCCACGACAATTGCGTCGTACACCGGCAGCCACTTGTAGGGATTGACAGTGACGCAGAACAAGCCAGAGTAGGTCTGAAACAGAGATAGTCCAGGTTTACAATGCTGCCGTCTCATcctagaaataaaacacaatttacttAGACTTACGTAGATCATCCATGCTGCGTAACGCTCTTTGAGGTTGTACAGCACACAAGGCTCATTGAGGTGGGTCATCATGGCCATGTCCTCGATTTTGTCAAACTTGGGAGGATTCATGGGGTGGATGTCCTCTTCTTTTACCGTGATTGTCTGTAATGAACATTAATCCGTAATCAAAAAGGATGAACGTTTTTGTACACGTTTTGTACAAACATttcactgtatttgttttaacttCTACAGACTCAATCACAGTAGCATATGATACTTACTTTCCCACACAGAGTTTTGACAGTAGCTTTGCCGCCCTCTCTGCCAGTAAGAGTACCCTTCAGGTACATCTGTTCTGGCTCTGCCACAAAGAACGCCGTTTTGGCATCAAAGGGGGTGTTCTGAGCCtcaattctctctctttctgtcttccgGAGGTAAATGGCCGCCGGGCCGAAACACTCCATTTCACCATCTCCCATGATGGCAGTTCACTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218495 lncRNA downstream 78810 181069 ~ 181616 (-) True G147867
TU218472 lncRNA downstream 171573 28530 ~ 88853 (-) True G147846
XR_006247732.1 lncRNA downstream 200910 58226 ~ 59516 (-) True LOC122327881
TU218471 lncRNA downstream 232538 25952 ~ 27888 (-) True G147845
TU218469 lncRNA downstream 236811 23149 ~ 23615 (-) True G147843
TU218775 lncRNA upstream 5350 283805 ~ 297185 (-) False G148043
TU218766 lncRNA upstream 6840 285295 ~ 299493 (-) False G148043
TU218757 lncRNA upstream 14255 292710 ~ 305251 (-) False G148038
TU218792 lncRNA upstream 78826 357281 ~ 435408 (-) True G148054
TU218791 lncRNA upstream 79622 358077 ~ 437316 (-) True G148053
XM_043223459.1 mRNA downstream 136159 122594 ~ 124267 (-) True LOC122327827
XM_043223749.1 mRNA upstream 167042 445497 ~ 448008 (-) True LOC122328026
XM_043223670.1 mRNA upstream 175396 453851 ~ 459470 (-) True LOC122327957
XM_043223725.1 mRNA upstream 190990 469445 ~ 472125 (-) True ndufaf3
XM_043223568.1 mRNA upstream 216793 495248 ~ 514839 (-) True si:ch1073-335m2.2
XM_043223822.1 mRNA upstream 237238 515693 ~ 524814 (-) True fblim1
TU218773 other upstream 3705 282160 ~ 355515 (-) False G148043
TU218774 other upstream 3705 282160 ~ 329388 (-) True G148043
TU218765 other upstream 3944 282399 ~ 355515 (-) False G148043
TU218771 other upstream 5350 283805 ~ 330835 (-) False G148043
TU218776 other upstream 5350 283805 ~ 393707 (-) False G148043

Expression Profile