RNA id: TU218757


Basic Information

Item Value
RNA id TU218757
length 205
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G148038
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 260426 ~ 305251 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

taatgctacataatgaaaatattgCATCAACACACTTCCAGACTCTACTTACCGCCGAGCATGAACTGGTAGGCGTTGTCAGAGATGGAGAAGATGTGAGGTGGGGCTTCAATCCTCTTTTTCCCTCTGTATCCAGCCACGACAACTGCGTCGTACACCGGCAGCCACTTGTAGGGATTGACAGTGACGCAGAACAAGCCAGAGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218755 lncRNA downstream 14255 260426 ~ 278455 (-) True G148038
TU218759 lncRNA downstream 17451 256277 ~ 275259 (-) True LOC122328031
XR_006247743.1 lncRNA downstream 17476 271341 ~ 275234 (-) False LOC122328031
XR_006247742.1 lncRNA downstream 17499 271341 ~ 275211 (-) False LOC122328031
TU218751 lncRNA downstream 25640 238567 ~ 267070 (-) True G148037
TU218792 lncRNA upstream 52030 357281 ~ 435408 (-) True G148054
TU218791 lncRNA upstream 52826 358077 ~ 437316 (-) True G148053
XR_006247741.1 lncRNA upstream 70247 375498 ~ 376262 (-) False LOC122328030
TU218788 lncRNA upstream 73928 379179 ~ 395690 (-) True G148050
TU218808 lncRNA upstream 82345 387596 ~ 424396 (-) True G148067
XM_043223459.1 mRNA downstream 168443 122594 ~ 124267 (-) True LOC122327827
XM_043223749.1 mRNA upstream 140246 445497 ~ 448008 (-) True LOC122328026
XM_043223670.1 mRNA upstream 148600 453851 ~ 459470 (-) True LOC122327957
XM_043223725.1 mRNA upstream 164194 469445 ~ 472125 (-) True ndufaf3
XM_043223568.1 mRNA upstream 189997 495248 ~ 514839 (-) True si:ch1073-335m2.2
XM_043223822.1 mRNA upstream 210442 515693 ~ 524814 (-) True fblim1
TU218764 other upstream 49661 354912 ~ 432599 (-) True G148042
TU218805 other upstream 70019 375270 ~ 376493 (-) True LOC122328030
TU218830 other upstream 284810 590061 ~ 592136 (-) False tmem240b
TU218879 other upstream 362253 667504 ~ 671420 (-) True G148116
TU218891 other upstream 370543 675794 ~ 679897 (-) False G148119

Expression Profile