RNA id: XR_006247743.1


Basic Information

Item Value
RNA id XR_006247743.1
length 1222
lncRNA type inter_gene
GC content 0.41
exon number 5
gene id LOC122328031
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 256277 ~ 275259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAAATCTATTTTGGATTATGTACTTGCattgtttaaatggttttacTATCCGTGCTTTGTGTAGGCTGTACTGTTGTTTAAATCTAGGTAATCTTATGTGAGTTTGCTTATTTATAGTGCTTAATTTGATGTCACAAGTCTTATTCCAGTGTAGTattcaaaaaaagaacagaacttGGCACAGATGAGTAACTTGGTTTGGATGTGGAGAAGCAGTCAGCTGTCACTGGTTTTCAGTTTCAGGAGAGACAGTAGCACCAAAAAAAGCTGTTGacttaaagcttttaaaaaaggttaCATACAACTTTTTTGGCAACCACTTGATCACCTGATATCATACACAATCATGACCTTTCCTGTGTGtttcagcatttgtttttgGACACACTTTTCCATGTCAAAAAGTCACGTAGCAGTATTTGCATATAATGTCATCTGTtcacaaatattagtttaaaacaTTCACCGAATCACGAAGATCTGCATGTATGTAACATTTAGTTAAATCTCAGGCATGTGAGCAGAGATTTGCAAATGGAAAATATCTGGCAGATTATTTATTGGGCAATTAAACCTTAGTGATCACTGCAATACTAATCTTGTTTCATAGTGATATTATGACTCAAAGTTATATACAGCATGTTCTTATATggagaaaacattaaatatagcaCAGTGAGAGCTTCTGTTTACATTGGGGGGAAGTTGTGAACAAATGCTTAGAGAGTCGGACATTTAACCCAAAGGTCACCGGTTTTGGTCTCGGTACCAGAAGAGATTATAGTTGGGGAAGTAAATAACCAGCGCTGTGTTCCACCCTCTATACCATGACTGAGGTCACAGTGAAGGCTTACCCAAGCTCTCGTCAATCCATCAATATCTTTCTGTACCTCCAATCCTGAAGGGTGACGAGAGCATTGGCGCTGTTCTGAACAGGGACTTCGGGATCCTCATCGttctCAGTGCACGTGATTCTTGGTTGCGGAGGGAGCATGGTCATAGTTCTGCTACCACAGCTGGAAAAAATCCTAGAGGAAACACTACAAGATTAGCTGCAACTGTACTAGTGATGCTAACTAGCATCACGGCTCTTGGCTCTCAGCTTGTTGACCTGGGACTCAGCGATGTCAGCACGCTCCTGAGCCTCCTCCATCTCGTGCTGCACCTTCCTGTACCTGGACAGGTGAGTGTTGGCCTGCTCCTCCTGTAAGGATGACACAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218751 lncRNA downstream 4271 238567 ~ 267070 (-) True G148037
TU218495 lncRNA downstream 89725 181069 ~ 181616 (-) True G147867
TU218472 lncRNA downstream 182488 28530 ~ 88853 (-) True G147846
XR_006247732.1 lncRNA downstream 211825 58226 ~ 59516 (-) True LOC122327881
TU218471 lncRNA downstream 243453 25952 ~ 27888 (-) True G147845
TU218775 lncRNA upstream 8571 283805 ~ 297185 (-) False G148043
TU218766 lncRNA upstream 10061 285295 ~ 299493 (-) False G148043
TU218757 lncRNA upstream 17476 292710 ~ 305251 (-) False G148038
TU218792 lncRNA upstream 82047 357281 ~ 435408 (-) True G148054
TU218791 lncRNA upstream 82843 358077 ~ 437316 (-) True G148053
XM_043223459.1 mRNA downstream 147074 122594 ~ 124267 (-) True LOC122327827
XM_043223749.1 mRNA upstream 170263 445497 ~ 448008 (-) True LOC122328026
XM_043223670.1 mRNA upstream 178617 453851 ~ 459470 (-) True LOC122327957
XM_043223725.1 mRNA upstream 194211 469445 ~ 472125 (-) True ndufaf3
XM_043223568.1 mRNA upstream 220014 495248 ~ 514839 (-) True si:ch1073-335m2.2
XM_043223822.1 mRNA upstream 240459 515693 ~ 524814 (-) True fblim1
TU218773 other upstream 6926 282160 ~ 355515 (-) False G148043
TU218774 other upstream 6926 282160 ~ 329388 (-) True G148043
TU218765 other upstream 7165 282399 ~ 355515 (-) False G148043
TU218771 other upstream 8571 283805 ~ 330835 (-) False G148043
TU218776 other upstream 8571 283805 ~ 393707 (-) False G148043

Expression Profile