RNA id: XR_006247741.1



Basic Information


Item Value
RNA id XR_006247741.1
length 394
lncRNA type inter_gene
GC content 0.57
exon number 3
gene id LOC122328030
representative False

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 375270 ~ 376493 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cacacactctcactcagtTGCTTTTATGTTTTCGGCTCAGGTCGGAGATGTTCGTGTTCGTTTCTCTTACGCCGGTCTCAGCGGTGACGGAATGTATCCTGGCCCCGCCCACAAGgtgAGCGTGGTGGCGATGCAGCGGGGCGATCAGCTCAAGCCCTTCCGGACGCGCTCCGGAGACCTGCTGGAGATCCTCTACATGGGTGACCTGTCAGCAGAGGAGGTTTTCGCTCGAGAGCATCAGCTCAACAACATGAAGACCTGGGCTCTGAGGCTCGGCGGCTGGGCCCTCATGTTCCTGAGCGTCAGTCTGAGCACACGGATCATTTACACACtgggtaacacacacacacacacacacacacacacacacacctctcactcttctctctctcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218767 lncRNA downstream 45548 251814 ~ 329950 (-) False G148043
TU218757 lncRNA downstream 70247 292710 ~ 305251 (-) False G148038
TU218766 lncRNA downstream 76005 285295 ~ 299493 (-) False G148043
TU218775 lncRNA downstream 78313 283805 ~ 297185 (-) False G148043
TU218753 lncRNA downstream 82584 260426 ~ 292914 (-) False G148038
TU218788 lncRNA upstream 2917 379179 ~ 395690 (-) True G148050
TU218808 lncRNA upstream 11334 387596 ~ 424396 (-) True G148067
TU218796 lncRNA upstream 20632 396894 ~ 421325 (-) True G148058
TU218840 lncRNA upstream 65466 441728 ~ 442668 (-) True G148095
TU218848 lncRNA upstream 75982 452244 ~ 453800 (-) True G148099
XM_043223459.1 mRNA downstream 251231 122594 ~ 124267 (-) True LOC122327827
XM_043223749.1 mRNA upstream 69235 445497 ~ 448008 (-) True LOC122328026
XM_043223670.1 mRNA upstream 77589 453851 ~ 459470 (-) True LOC122327957
XM_043223725.1 mRNA upstream 93183 469445 ~ 472125 (-) True ndufaf3
XM_043223568.1 mRNA upstream 118986 495248 ~ 514839 (-) True si:ch1073-335m2.2
XM_043223822.1 mRNA upstream 139431 515693 ~ 524814 (-) True fblim1
TU218773 other downstream 19983 282160 ~ 355515 (-) False G148043
TU218830 other upstream 213799 590061 ~ 592136 (-) False tmem240b
TU218879 other upstream 291242 667504 ~ 671420 (-) True G148116
TU218891 other upstream 299532 675794 ~ 679897 (-) False G148119
TU218899 other upstream 407601 783863 ~ 788153 (-) False srsf3b
TU218900 other upstream 407601 783863 ~ 788153 (-) True srsf3b

Expression Profile