RNA id: TU218840



Basic Information


Item Value
RNA id TU218840
length 941
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G148095
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 441728 ~ 442668 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ctggtctctgatgaacataatctctgggtgctgatccaccatctagtctggatacaaactgtgaaaacagattgagaaagaaacatggggttttgtttccttgccgctgtcgcctctggtttgcttggttggggacacttaacttctagtgatttaacgtcgaatcgactacagagaccgtctctgcatttaataagaaattggtcactctcgtcattatatatccctgtcattatactgtacagtgctttgatgcaacctgtgttgttaaaagcgctatataaataaaaatgattgattgattgattgattgattgattgatatgatacctccacatatcagatagatatgatttaaaccatgctaaggcgcttcctctaatgccaacatagttttctagtctcttcaagagaatgttgtgatggatagtatcgaatgctgcgctaagatctaatagcactaataatgagataaaaccacgatcagatgatagaagcaggtcattcgtgactctaatgagagcagtacggtctaaaacctgattggaaatcctcacagacaccatttttttctaaaaaggaatacagttgtgaggatactaccttttctagtatctttgacagaaaagggagattagagattggtctgtaatttactaagtctttgggatcaagatgtggtttcttaatgagaggcttaactacagccagtttgaaggttttgggaacataacctaatgacaatgatgaattaataatgttcaaaataggatctatgacttctggaagcagatcttttaatagtttagatggaatagggtctaacatacatgttgctggtttagatgatttaacaagtcgAGGAGTGCTGTCAGAGGTAGTACACAAGTAGTAAGTGGATACATCTTTTCTGGAGTTGGTTGAATGACAATCATCAGAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218791 lncRNA downstream 4412 358077 ~ 437316 (-) True G148053
TU218792 lncRNA downstream 6320 357281 ~ 435408 (-) True G148054
TU218808 lncRNA downstream 17332 387596 ~ 424396 (-) True G148067
TU218796 lncRNA downstream 20403 396894 ~ 421325 (-) True G148058
TU218788 lncRNA downstream 46038 379179 ~ 395690 (-) True G148050
TU218848 lncRNA upstream 9576 452244 ~ 453800 (-) True G148099
TU218826 lncRNA upstream 30208 472876 ~ 473546 (-) True G148081
TU218836 lncRNA upstream 36827 479495 ~ 480720 (-) True G148091
TU218834 lncRNA upstream 39543 482211 ~ 558874 (-) True G148089
TU218892 lncRNA upstream 232308 674976 ~ 679897 (-) True G148119
XM_043223459.1 mRNA downstream 317461 122594 ~ 124267 (-) True LOC122327827
XM_043223749.1 mRNA upstream 2829 445497 ~ 448008 (-) True LOC122328026
XM_043223670.1 mRNA upstream 11183 453851 ~ 459470 (-) True LOC122327957
XM_043223725.1 mRNA upstream 26777 469445 ~ 472125 (-) True ndufaf3
XM_043223568.1 mRNA upstream 52580 495248 ~ 514839 (-) True si:ch1073-335m2.2
XM_043223822.1 mRNA upstream 73025 515693 ~ 524814 (-) True fblim1
TU218764 other downstream 9129 354912 ~ 432599 (-) True G148042
TU218776 other downstream 48021 283805 ~ 393707 (-) False G148043
TU218805 other downstream 65235 375270 ~ 376493 (-) True LOC122328030
TU218773 other downstream 86213 282160 ~ 355515 (-) False G148043
TU218830 other upstream 147393 590061 ~ 592136 (-) False tmem240b
TU218879 other upstream 224836 667504 ~ 671420 (-) True G148116
TU218891 other upstream 233126 675794 ~ 679897 (-) False G148119
TU218899 other upstream 341195 783863 ~ 788153 (-) False srsf3b
TU218900 other upstream 341195 783863 ~ 788153 (-) True srsf3b

Expression Profile