Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU220504 |
| length | 385 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G149076 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056720.1 |
| NCBI id | CM032089.1 |
| chromosome length | 18002998 |
| location | 3242421 ~ 3242805 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU220502 | lncRNA | downstream | 6662 | 3233672 ~ 3235759 (-) | True | G149074 |
| TU220500 | lncRNA | downstream | 17894 | 3224148 ~ 3224527 (-) | False | dnase1l4.1 |
| TU220496 | lncRNA | downstream | 47617 | 3193288 ~ 3194804 (-) | True | G149071 |
| TU220267 | lncRNA | downstream | 139524 | 3102579 ~ 3102897 (-) | True | G148927 |
| TU220258 | lncRNA | downstream | 183790 | 3058010 ~ 3058631 (-) | False | LOC122327369 |
| TU220509 | lncRNA | upstream | 8444 | 3251249 ~ 3251471 (-) | True | G149081 |
| TU220574 | lncRNA | upstream | 107288 | 3350093 ~ 3353485 (-) | True | G149111 |
| TU220577 | lncRNA | upstream | 107649 | 3350454 ~ 3351332 (-) | False | G149114 |
| TU220578 | lncRNA | upstream | 107893 | 3350698 ~ 3351474 (-) | True | G149114 |
| TU220575 | lncRNA | upstream | 125345 | 3368150 ~ 3372307 (-) | True | G149112 |
| XM_043222892.1 | mRNA | downstream | 10208 | 3224335 ~ 3232213 (-) | False | dnase1l4.1 |
| XM_043222893.1 | mRNA | downstream | 13179 | 3224335 ~ 3229242 (-) | False | dnase1l4.1 |
| XM_043222891.1 | mRNA | downstream | 13179 | 3224335 ~ 3229242 (-) | True | dnase1l4.1 |
| XM_043222698.1 | mRNA | downstream | 18920 | 3220932 ~ 3223501 (-) | False | ccdc51 |
| XM_043222697.1 | mRNA | downstream | 18920 | 3220932 ~ 3223501 (-) | True | ccdc51 |
| XM_043222942.1 | mRNA | upstream | 9308 | 3252113 ~ 3253715 (-) | True | LOC122327520 |
| XM_043222719.1 | mRNA | upstream | 12591 | 3255396 ~ 3273042 (-) | True | cers5 |
| XM_043222803.1 | mRNA | upstream | 30330 | 3273135 ~ 3277399 (-) | True | LOC122327437 |
| XM_043222656.1 | mRNA | upstream | 37804 | 3280609 ~ 3286516 (-) | False | LOC122327353 |
| XM_043222655.1 | mRNA | upstream | 37804 | 3280609 ~ 3286516 (-) | True | LOC122327353 |
| unassigned_transcript_2543 | other | downstream | 362016 | 2880334 ~ 2880405 (-) | True | trnad-guc_19 |
| unassigned_transcript_2542 | other | downstream | 362786 | 2879564 ~ 2879635 (-) | True | trnad-guc_18 |
| unassigned_transcript_2541 | other | downstream | 1111138 | 2131213 ~ 2131283 (-) | True | trnag-gcc_103 |
| unassigned_transcript_2540 | other | downstream | 1111463 | 2130887 ~ 2130958 (-) | True | trnad-guc_17 |
| unassigned_transcript_2539 | other | downstream | 1111725 | 2130623 ~ 2130696 (-) | True | trnai-aau_114 |
| XR_006247638.1 | other | upstream | 13204 | 3256009 ~ 3273051 (-) | False | cers5 |
| XR_006247635.1 | other | upstream | 104615 | 3347420 ~ 3349172 (-) | False | si:rp71-36a1.1 |
| TU220553 | other | upstream | 145455 | 3388260 ~ 3414711 (-) | False | G149102 |
| TU221027 | other | upstream | 448695 | 3691500 ~ 3878716 (-) | True | G149410 |
| TU221146 | other | upstream | 913687 | 4156492 ~ 4158981 (-) | True | G149491 |
