RNA id: XM_043223491.1


Basic Information

Item Value
RNA id XM_043223491.1
length 5096
RNA type mRNA
GC content 0.40
exon number 18
gene id glsa
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6822203 ~ 6939000 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCGCGTGAACACACGCCAAGAGACGAGGGAAGAAACCGGCACGACTGTCCAAAAGGAGAATATTCTCGCGTCCTTACAGTCTAACATCACCAGCGTTACTGTCGGAAGTCTTTCTGTTCAGCCTGCCGGGTTTGAAATGTTACAGTTTAGGTTTTCGAGGGCGTTAAAGGAGTTTTGCAAACCCAATCTAAAGCGCCTTTGGAAAACTAGTAGAGATAACACAGCCGCCGCCGCCGGAGGATGCGCTTCTTCGTTCAGACGATCCCTGTGCACGCAGACAGATGCGGCCAACGAGAAGAAGGCAGGCATTTTGCCCAGCCTGGAAGATCTGCTGTTTTACACCATTGCCGAAGGCCAGGAGAAAATTCCAGCTCACAAATTCACCACGGCGCTGAAATCCACAGGTCTGCGTACTGGAGACCCTCGTCTTAAGGAGTGTATGGAGATGTTAAAGGTCACCCTGAAGACCACATCGGACGGCGCGCTCGATCGACATCtcttcaaaaagTGTGTGCAAAGCAACATTGTGTTGCTAACGCAGGCTTTCCGGAAAAAGTTCGTCATTCCTGACTTCCAGTCGTTTACCTCTCACGTCGATCAAATTTACGAGAGCGCTAAATCACTGTCAGGTGGCCAGgTGGCAGATTACATTCCTCAGTTAGCGAAATTTAGCCCAAATCTCTGGGCCGTGGCCCTGTGCACCGTAGATGGCCAACGGTACACTGCGGGTGACACGAAAGTCCCGTTTTGTCTGCAGTCGTGCGTGAAACCGTTAAAGTACGCAGTAGCCGTTCACGATCACGGCACCGAATACGTGCACCGCTTTATAGGAAAGGAGCCCAGCGGCCTTCGTTTCAACAAACTCTTTCTTGACGAAGATGataaacCTCACAATCCCATGGTAAACGCCGGCGCCATAGTTTGCACCTCCCTCCTCAAGCAAGGTGTAAGCAACGCTGAGAAGTTTGACTATgtGATGAACTTTATGAAGAAGTTGGCAGGAAATGAATACGTCGGTTTCAGCAATGCTACGTTTCAGTCCGAGCGACTGTCAGGTGACAGAAACTTTGCCATTGGTTACTACTTAAAGGAAAAGAAGTGTTTCCCAGAAGGTACAGATATGATCTCCATCCTGGACCTTTACTTCCAGCTGTGCTCCATCGAGGTAACCTGCGAAAGCGCCAGTGTGATGGCCGCCACCCTGGCGAACGGCGGCTTCTGTCCGATCACGGGCGAGCGCGTGCTGAACCCCGAGGCCGTGCGGAACACTCTGAGCCTCATGCACTCCTGCGGCATGTACGACTTCTCCGGACAGTTTGCTTTCCATGTCGGTCTCCCGGCTAAATCGGGGGTCTCTGGAGGCATCCTGCTGGTGGTGCCTAATGTGATGGGCATCATGTGTTGGTCTCCTCCTCTTGACAAACTGGGCAACAGTGTTCGAGGAATCCAGTTTTGCACGgatCTGGTCCAGCTCTTTAATTTCCACAACTATGATAATTTACGCCACTTTGCCAAGAAACTGGATCCACGCCGAGAGGGCGGAGACCAGCGGGTCAAGTCGGTCATAAACCTGCTGTTTGCGGCCTACACGGGAGACGTGTCTGCTCTGAGAAGGTTCGCGCTCTCATCGATGGATATGGAGCAGAGAGATTACGACTCTCGGACGGCTCTTCATGTAGCTGCTGCCGAAGGTCACGCTGAGGTTGTTCGTTTTCTTCTAGAAGCTTGTAAGGTGAACCCGGTGCCCAGAGACAGGTGGGGTAACACTCCCATGGACGAGGCCATTCATTTTGGCCATCACGATGTCGTAACAATCCTGCAGGACTATCACAACACCTACAGCCCCAAGGAGACCACCGCCGACAGCGACAAGGAGACGGTCGAGAAGAACCTGGACGGGATGCTGTAGAGATGATAAAACGCTCCACATGTTTCCCAGTGAGTGTCTGAGGTATTCTTTTGAGAAGAAagcatacaaaacaaaacaaaaaaaacagcctttggGCCCCTTTCCCCTGTTTTGTGacgttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacctccATTAACATGGTAAATTTGTTTTATCTTACACTTGGGGGAATGTAGCCTCATAAAGGTCTTATTTAGCTGTATCTCCACATAAACGTACGATACAAATTTAATATACTCAATACAAGTAAATCTATTaaaaggtgtatatatatagttcatgtACATTCATTTATGGTTTGAGAACCTTCATAGATAATGATGTCAAATAGATATTTAAGAAAAGGCAGCTTGACTAGAGAAGGTAGCATTGGGAGGGATTTGATTTGTTTCCATGATTTGATCCCTTTTCTTCTCCCTATAGTTTGTTATAAATCAACATGAAAAACAGTTGTAGTTCCATATGCCTTTTATTTGCGTATCATGTTGTGAATATGTTCCAAATTACGCtgtttttgattgtttaaaaaatgcactttttttatttatttattttttatttgtattatatttatttatttgtctttcaacatctttttttattttaaatcaaggtaacactttacatttaagTTTCACAATtatagttaacattagttaatttaGGTACCGTACTAATAATTAACTATTGATTTATtcaggcaaaaataaaaaaaaaaatactgttgttCAAAATAGTATTATAAAAGTATTGTAATTGATCGTTACTTCGTGATGCGCATCTCCTAATGTTAACTACGTGAAacttattgtgaagtgttaccGAATTGCTTTGACGCACTAGAAGCAACTTTTTTTCCGTACCAGCCTGTTCGGTGAACTACAGGAATTTCCTGTATTTGATATGTGCTTGATgtcaatgaatgaaaatattaaaattgtcaCCAGAAACACTTAGACACTAGAAAAAgacactgtaattaaaaaaaaaaacctgtaagtTCATTATGCTACAAGAATTTCCTGTATTTGATATCTATCGAatttagttacatttaatatatatgccatcaaaatgactttaaaactcCAGAAGGCCGGTTTCACACCTTCCTGTTCAATGCACTACAGGGATTTCCTGTATTTAATAGCCATCTACCTGACTGATGCAAACGAATTGAAAATTGTCAAGTGTTACTTTACGATTATTGTTAAAGCGCCAAgagaaaaaagctaattatacCTGCCTGTTCATTGTACTACAGGAATGATTTGTATTTGATACCTGTATATGTCATGTTAACCAAAATTAATTGTAATCACGTTAAAGCATTCTTTTCTTACTTGGCCGTTCATTGTACTACAAGAACGACCTGTATTCAGTACTTGTGTTTTACACTTTAACATTAGTGAAGGGTCACCATAATTACTTTAAAGCCCTAGAAGGACCATTTTTGTGAAAGGACCAGACTTTCTCTGTACTACAATAATTCCCTGTATTTCTGTTCAACCACTTAACTAGTTGAAAACGTTTGTCACGAAGTACTAGGACAATTTTTCCACCTTCCTGTTCTTTCTACTACCTGAATTTCctgtatttcttatttaaatttcGGTTTATTAACATTAGTGAAGTGAAATTCCTACCTACAGGAATTTCATGTATTTGATAGCTAGCTGCTAAACTAAAGTTAACGTTAACTAATTGTAAAGTGTTgccaaatgactttttttttttttttttttactgtataccATATCTGCTCActcaactaatgttaacaaagttATTGTAAAGAATCAccaaaaccactttaaagcaCTAGGAGCATTTTCACCTGAACATTAAATTACAGGAATTCCCCGTATTTGATACTTATCTAATGATAACGAAAATAAACGTTTTGGAAATTCACAaaaattcctaaaaaaaaaaaagaccatgtCCTATGTTCTTTTCCTACCTTTCCTGTATTTCATACCAATATAATTGAAAGTAGGTGtccatttattaacattagtttgGCATTATgacattgatttaaaacattagaaGGACCATTTTCTTACCCGCCCATCAATGTACTACAGGAATTTCCTGTATTTATCTAtcaaactaatgttaacaaatcaaaattaattgcaaattgtTACCAAATTAGTTCTCACACCTGATGCTTCATTGTACTGCAGGAACTTCCTGTATTTTTGAACAgcgatgtgttttttttttttttttttttaagcatgattTAAATCTTACGGCAgttgtttaatgaataattatgtgGAAAACGAACACAAGTAGCATCCAAACTGGACTGCAGTGTCGCCTTTTGAATATCCTGCAAGATATTCAAATGCAGGATGTGAAAACTGATTTGTCCCGTAGCTTTTAGATTAGCATTCGTGTATGAAAAAGAaccaagcaaaaaaataataataattctgttttattgtcgGTACATGGTAAAATGACAAGTAAAATTCGAaattaaacagacaaaaatgcaCTGGAATTGCTCGCAACGCAGTCGAACTTGTCCCGTCAGTTGGGTCCTTCGGTGAAATTACTTTATGAACGGTTAGTTTTATGTCTGTAAACACGTATCCAGAAAAGCACACTGATTGTTCTAATGTACAGTACGGACGACAGAGAGGCGCGCGTATACTTGAAAAACCTCCAAAGTTGATCTAAACTATGTGAATATTTTCTAGTGGGACACTATGGTTGAAGtattgtaaatgtgttttgtaatgagtgtgtgtgagtgtggaaaatttgttatatataggaaaaaaaccaaaaaatcgAAGCAACTCAACAAAGAGACTCGACGATACAAACAAAAGTAGGTCACTGATCGTATTCAACTTTGTACGTTTCTTTGTCGCGTTTTAGTCCATTTTTGTCGCATTGTGTAATTTCTTGTTTTTGCGGAGAAAGGAGTTACGagttttttctgcatttgtttattactgCTATGAATGTATCGCATTGTCGTCCTTGTTGTGATATTTCCTTTcgatttgcttttatttaactatGCTATACTGTGGATGTTCtagatttgtttgcatttaatgtCAAAGAAAATGATCGATATATTCCACACAAGAAATGCtagataaaaacaataaaggcTTTGAACATA

Function

GO:

id name namespace
GO:0006541 glutamine metabolic process biological_process
GO:0004359 glutaminase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU222719 lncRNA downstream 18045 6799163 ~ 6805440 (-) True G150472
TU222708 lncRNA downstream 107536 6714794 ~ 6715949 (-) False cep70
TU222664 lncRNA downstream 164133 6515565 ~ 6659352 (-) False G150440
TU222747 lncRNA upstream 28807 6871652 ~ 6873176 (-) False mfsd6a
TU222748 lncRNA upstream 43704 6886549 ~ 6887136 (-) True G150488
TU222750 lncRNA upstream 56398 6899243 ~ 6902815 (-) True G150490
TU222754 lncRNA upstream 96773 6939618 ~ 6940626 (-) True G150494
TU222764 lncRNA upstream 160115 7002960 ~ 7004118 (-) True G150503
XM_043223046.1 mRNA downstream 26400 6791674 ~ 6797085 (-) True cnot9
XM_043222330.1 mRNA downstream 33956 6775322 ~ 6789529 (-) True plcd4a
XM_043222221.1 mRNA downstream 48788 6758285 ~ 6774697 (-) True slx9
XM_043223467.1 mRNA downstream 69928 6729782 ~ 6753557 (-) False adarb1a
XM_043222290.1 mRNA upstream 4045 6846890 ~ 6856898 (-) True nab1a
XM_043223880.1 mRNA upstream 22378 6865223 ~ 6873200 (-) True mfsd6a
XM_043223881.1 mRNA upstream 31614 6874459 ~ 6880468 (-) True LOC122328175
XM_043222300.1 mRNA upstream 84119 6926964 ~ 6929270 (-) True LOC122327117
XM_043223882.1 mRNA upstream 86305 6929150 ~ 6934573 (-) True LOC122328177
TU222663 other downstream 164133 6617575 ~ 6659352 (-) True G150440
TU222327 other downstream 537908 6282456 ~ 6285577 (-) True gcga
TU222410 other downstream 586620 6236252 ~ 6236865 (-) True G150276
TU222356 other downstream 830762 5989500 ~ 5992723 (-) True use1
TU222175 other downstream 962168 5859347 ~ 5861317 (-) False timm13
TU222738 other upstream 11925 6854770 ~ 6856863 (-) False nab1a
TU222739 other upstream 11925 6854770 ~ 6889657 (-) False nab1a
TU222740 other upstream 11925 6854770 ~ 6881469 (-) False nab1a
TU222746 other upstream 24998 6867843 ~ 6869546 (-) False mfsd6a
TU222752 other upstream 63155 6906000 ~ 6913558 (-) True G150492

Expression Profile