RNA id: TU222739



Basic Information


Item Value
RNA id TU222739
length 541
RNA type TUCP
GC content 0.58
exon number 3
gene id nab1a
representative False

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6846890 ~ 6889657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cagagagagagagagagagagagagagagacggcacCGATGAGTCTTCAACGCGCTTTCTCTCCTTCGCGAGACGGAGCGCTGCCTCGAGACGGCGGCCAGCACCGGGAGCAGTCGCGCGCACCAGCTGCGAAAAAGAGCCATGTCAGTGCTGCTGCCACGTTCCTTGGGCGAGCTGCAACTGTACCGGATCCTGCAGAAGGCCAACTTGCTCTGCTACTACGAAGCCTTCATCCAGCAGGGCGGCGACGATGTGCAGCAGCTCTGAGGCTGGCGAGGAAGAGTTCCTCGAGATCATGGCCCTTGTTGGAATGGCGACCAAACCCCTTCATGTTCGAAGACTCCAGAAAGCTCTACGGGATTGGGTCACCAACCCTTCCGTCTTCAACCAACCGTTGACATCTCTTCCCGTTTGCAGTATACCGGTGTACAAGCTACCCGAAAGTTCCAACAGCAATGGGCAACAGAACCAACTTGCGGTTCCCAGAGCATTGTTACCCACAAGCCCCAGTCCTGGAAGGCTGGACCTCAGCAGGGACGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU222719 lncRNA downstream 49330 6799163 ~ 6805440 (-) True G150472
TU222708 lncRNA downstream 138821 6714794 ~ 6715949 (-) False cep70
TU222687 lncRNA downstream 245142 6607789 ~ 6609628 (-) True G150456
TU222668 lncRNA downstream 248216 6603055 ~ 6606554 (-) True G150442
TU222684 lncRNA downstream 255237 6597904 ~ 6599533 (-) True G150453
TU222750 lncRNA upstream 9586 6899243 ~ 6902815 (-) True G150490
TU222754 lncRNA upstream 49961 6939618 ~ 6940626 (-) True G150494
TU222764 lncRNA upstream 113303 7002960 ~ 7004118 (-) True G150503
TU222802 lncRNA upstream 115399 7005056 ~ 7005447 (-) True G150538
TU222805 lncRNA upstream 131106 7020763 ~ 7021683 (-) False LOC122327113
XM_043223490.1 mRNA downstream 11925 6823485 ~ 6842845 (-) True glsa
XM_043222300.1 mRNA upstream 37307 6926964 ~ 6929270 (-) True LOC122327117
XM_043223882.1 mRNA upstream 39493 6929150 ~ 6934573 (-) True LOC122328177
XM_043222299.1 mRNA upstream 72857 6962514 ~ 6971960 (-) False LOC122327116
XM_043222298.1 mRNA upstream 72857 6962514 ~ 6971958 (-) True LOC122327116
XM_043222297.1 mRNA upstream 96908 6986565 ~ 6994634 (-) True LOC122327115
TU222663 other downstream 195418 6617575 ~ 6659352 (-) True G150440
TU222327 other downstream 569193 6282456 ~ 6285577 (-) True gcga
TU222410 other downstream 617905 6236252 ~ 6236865 (-) True G150276
TU222356 other downstream 862047 5989500 ~ 5992723 (-) True use1
TU222175 other downstream 993453 5859347 ~ 5861317 (-) False timm13
TU222752 other upstream 16343 6906000 ~ 6913558 (-) True G150492
TU222808 other upstream 140650 7030307 ~ 7055202 (-) False LOC122327113
XR_006247718.1 other upstream 720199 7609856 ~ 7618398 (-) False LOC122327776
XR_006247717.1 other upstream 720199 7609856 ~ 7618398 (-) True LOC122327776
TU223633 other upstream 1994464 8884121 ~ 8886941 (-) True G151107

Expression Profile