RNA id: TU222746



Basic Information


Item Value
RNA id TU222746
length 310
RNA type TUCP
GC content 0.50
exon number 2
gene id mfsd6a
representative False

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6865223 ~ 6873200 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTACAGTACAGCACCGTGTTGTTCGTGGCATGGTTCATGGGCTTCGGCTATGGGTTTGTTTTCACTTTCCTTTACTGGCATTTACAGGACCTGACAGGAACCACAACGCTGTTTGGTGTTTGTTCTGTTCTGAGTCACGTGTCGGAGCTTGCTGCCTATTTCACCAGCCATAAGTTCATTGAACTGGTAGGACACATCAGAGTTTTGTACATCGGTCTGGCCTGCAACACCGCACGCTACCTCTATATCTCGTATCTCAAGAACGCCTGGACCGTGCTGCCAATGGAAGTGCTGCAAGGTACGAATGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU222719 lncRNA downstream 62403 6799163 ~ 6805440 (-) True G150472
TU222708 lncRNA downstream 151894 6714794 ~ 6715949 (-) False cep70
TU222687 lncRNA downstream 258215 6607789 ~ 6609628 (-) True G150456
TU222668 lncRNA downstream 261289 6603055 ~ 6606554 (-) True G150442
TU222684 lncRNA downstream 268310 6597904 ~ 6599533 (-) True G150453
TU222747 lncRNA upstream 2106 6871652 ~ 6873176 (-) False mfsd6a
TU222748 lncRNA upstream 17003 6886549 ~ 6887136 (-) True G150488
TU222750 lncRNA upstream 29697 6899243 ~ 6902815 (-) True G150490
TU222754 lncRNA upstream 70072 6939618 ~ 6940626 (-) True G150494
TU222764 lncRNA upstream 133414 7002960 ~ 7004118 (-) True G150503
XM_043222290.1 mRNA downstream 10945 6846890 ~ 6856898 (-) True nab1a
XM_043223490.1 mRNA downstream 24998 6823485 ~ 6842845 (-) True glsa
XM_043223881.1 mRNA upstream 4913 6874459 ~ 6880468 (-) True LOC122328175
XM_043222300.1 mRNA upstream 57418 6926964 ~ 6929270 (-) True LOC122327117
XM_043223882.1 mRNA upstream 59604 6929150 ~ 6934573 (-) True LOC122328177
XM_043222299.1 mRNA upstream 92968 6962514 ~ 6971960 (-) False LOC122327116
XM_043222298.1 mRNA upstream 92968 6962514 ~ 6971958 (-) True LOC122327116
TU222738 other downstream 10980 6854770 ~ 6856863 (-) False nab1a
TU222663 other downstream 208491 6617575 ~ 6659352 (-) True G150440
TU222327 other downstream 582266 6282456 ~ 6285577 (-) True gcga
TU222410 other downstream 630978 6236252 ~ 6236865 (-) True G150276
TU222356 other downstream 875120 5989500 ~ 5992723 (-) True use1
TU222752 other upstream 36454 6906000 ~ 6913558 (-) True G150492
TU222808 other upstream 160761 7030307 ~ 7055202 (-) False LOC122327113
XR_006247718.1 other upstream 740310 7609856 ~ 7618398 (-) False LOC122327776
XR_006247717.1 other upstream 740310 7609856 ~ 7618398 (-) True LOC122327776
TU223633 other upstream 2014575 8884121 ~ 8886941 (-) True G151107

Expression Profile