RNA id: TU222750



Basic Information


Item Value
RNA id TU222750
length 326
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G150490
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6899243 ~ 6902815 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ccaaaGGTCGCACCCACTTATTACGCCTCCTATACCAAACAGAACTCCTCTCTGGAGCATATCTTGGGATTAGCCCCACCTTCAAACCTTCCCTCATTGACAAATTATAGCTCGGAACTGACCCATGACGCCACCCACAGTAAGaTTGAGACGGGCTTTATACTCAACTCTGCTAGTGTGGCCTACACAGGAAGTTGTTTGGTCCCCAACGGCAATGCAGTGGCCACACCTGGCAACAGTCCCCACCCCCTTCCTGAGCCACTCCCACCTCCCCCAGACCCTCAGACCACTGGTTTCTACCTCTGAACACACTCAATACAGATCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU222748 lncRNA downstream 12107 6886549 ~ 6887136 (-) True G150488
TU222747 lncRNA downstream 26067 6871652 ~ 6873176 (-) False mfsd6a
TU222719 lncRNA downstream 93803 6799163 ~ 6805440 (-) True G150472
TU222708 lncRNA downstream 183294 6714794 ~ 6715949 (-) False cep70
TU222687 lncRNA downstream 289615 6607789 ~ 6609628 (-) True G150456
TU222754 lncRNA upstream 36803 6939618 ~ 6940626 (-) True G150494
TU222764 lncRNA upstream 100145 7002960 ~ 7004118 (-) True G150503
TU222802 lncRNA upstream 102241 7005056 ~ 7005447 (-) True G150538
TU222805 lncRNA upstream 117948 7020763 ~ 7021683 (-) False LOC122327113
TU222806 lncRNA upstream 119586 7022401 ~ 7022697 (-) True G150542
XM_043223881.1 mRNA downstream 18775 6874459 ~ 6880468 (-) True LOC122328175
XM_043223880.1 mRNA downstream 26043 6865223 ~ 6873200 (-) True mfsd6a
XM_043222290.1 mRNA downstream 42345 6846890 ~ 6856898 (-) True nab1a
XM_043223492.1 mRNA downstream 56398 6828460 ~ 6842845 (-) False glsa
XM_043223494.1 mRNA downstream 64017 6823485 ~ 6835226 (-) False glsa
XM_043222300.1 mRNA upstream 24149 6926964 ~ 6929270 (-) True LOC122327117
XM_043223882.1 mRNA upstream 26335 6929150 ~ 6934573 (-) True LOC122328177
XM_043222299.1 mRNA upstream 59699 6962514 ~ 6971960 (-) False LOC122327116
XM_043222298.1 mRNA upstream 59699 6962514 ~ 6971958 (-) True LOC122327116
XM_043222297.1 mRNA upstream 83750 6986565 ~ 6994634 (-) True LOC122327115
TU222739 other downstream 9586 6854770 ~ 6889657 (-) False nab1a
TU222740 other downstream 17774 6854770 ~ 6881469 (-) False nab1a
TU222746 other downstream 29697 6867843 ~ 6869546 (-) False mfsd6a
TU222738 other downstream 42380 6854770 ~ 6856863 (-) False nab1a
TU222663 other downstream 239891 6617575 ~ 6659352 (-) True G150440
TU222752 other upstream 3185 6906000 ~ 6913558 (-) True G150492
TU222808 other upstream 127492 7030307 ~ 7055202 (-) False LOC122327113
XR_006247718.1 other upstream 707041 7609856 ~ 7618398 (-) False LOC122327776
XR_006247717.1 other upstream 707041 7609856 ~ 7618398 (-) True LOC122327776
TU223633 other upstream 1981306 8884121 ~ 8886941 (-) True G151107

Expression Profile