RNA id: TU222754



Basic Information


Item Value
RNA id TU222754
length 359
lncRNA type inter_gene
GC content 0.30
exon number 2
gene id G150494
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6939618 ~ 6940626 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGGTGAACTACAGGAATTTCCTGTATTTGATATGTGCTTGATGTCAATGaatgaaaatactaaaattgTCACCAGAAACACTTAGACACTAGAAAAAgacactgtaattaaaaaaaaaaaaaactTGAAGTTAAAATTCCTACCTACAGGAATTTCATGTATTTGATAGCTAGCTGCTAAACTAAAGTTAACGTTAACTAATTGTAAAGTGTTgccaaatgactttttttttttttttttactgtataccATATCTGCTCACtcaactaatattaacaaagtTATTATAAAGAATCCAccaaaaccactttaaagcaCTAGGAGCATTTTCACCTGAACATTAAATTACAGGAATTCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU222714 lncRNA downstream 618 6822203 ~ 6939000 (-) False glsa
TU222750 lncRNA downstream 36803 6899243 ~ 6902815 (-) True G150490
TU222748 lncRNA downstream 52482 6886549 ~ 6887136 (-) True G150488
TU222747 lncRNA downstream 66442 6871652 ~ 6873176 (-) False mfsd6a
TU222719 lncRNA downstream 134178 6799163 ~ 6805440 (-) True G150472
TU222764 lncRNA upstream 62334 7002960 ~ 7004118 (-) True G150503
TU222802 lncRNA upstream 64430 7005056 ~ 7005447 (-) True G150538
TU222805 lncRNA upstream 80137 7020763 ~ 7021683 (-) False LOC122327113
TU222806 lncRNA upstream 81775 7022401 ~ 7022697 (-) True G150542
XR_006247727.1 lncRNA upstream 230716 7171342 ~ 7174445 (-) True LOC122327846
XM_043223882.1 mRNA downstream 5045 6929150 ~ 6934573 (-) True LOC122328177
XM_043222300.1 mRNA downstream 10348 6926964 ~ 6929270 (-) True LOC122327117
XM_043223881.1 mRNA downstream 59150 6874459 ~ 6880468 (-) True LOC122328175
XM_043223880.1 mRNA downstream 66418 6865223 ~ 6873200 (-) True mfsd6a
XM_043222290.1 mRNA downstream 82720 6846890 ~ 6856898 (-) True nab1a
XM_043222299.1 mRNA upstream 21888 6962514 ~ 6971960 (-) False LOC122327116
XM_043222298.1 mRNA upstream 21888 6962514 ~ 6971958 (-) True LOC122327116
XM_043222297.1 mRNA upstream 45939 6986565 ~ 6994634 (-) True LOC122327115
XM_043222301.1 mRNA upstream 57282 6997908 ~ 7002547 (-) True LOC122327118
XM_043222295.1 mRNA upstream 80128 7020754 ~ 7055562 (-) True LOC122327113
TU222752 other downstream 26060 6906000 ~ 6913558 (-) True G150492
TU222739 other downstream 49961 6854770 ~ 6889657 (-) False nab1a
TU222740 other downstream 58149 6854770 ~ 6881469 (-) False nab1a
TU222746 other downstream 70072 6867843 ~ 6869546 (-) False mfsd6a
TU222738 other downstream 82755 6854770 ~ 6856863 (-) False nab1a
TU222808 other upstream 89681 7030307 ~ 7055202 (-) False LOC122327113
XR_006247718.1 other upstream 669230 7609856 ~ 7618398 (-) False LOC122327776
XR_006247717.1 other upstream 669230 7609856 ~ 7618398 (-) True LOC122327776
TU223633 other upstream 1943495 8884121 ~ 8886941 (-) True G151107
XR_006247692.1 other upstream 2072922 9013548 ~ 9171931 (-) False nfia

Expression Profile