RNA id: TU223385



Basic Information


Item Value
RNA id TU223385
length 1169
RNA type TUCP
GC content 0.50
exon number 1
gene id G150940
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8901143 ~ 8902311 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATCTGACCAAAAACGGCACGCGTGGCTGCGACTTTAATCGAactcaaacaataaaataaaacagttaacaGAAGCACCGCCGCTAGCTGTCGACAGATAAGAAACGTGTCGTTTTAAGGCTGATTTACAGCCGTTTTATGGCTGTTTCCTGCTACTTAGGCGCTGATGTGGTGCAAGAGGTACCTGTGCTTTTGCTGTTGGGCTCGGTGATGTTTCTGCTGTTGTTGCTGAGGGTTTGAGAGGGGGGCGGAACCACGGCAGGGGGCGTGGGGGTTGGGGTGCTGCTGTTGGCGCTCACGTGGCTCATCTAAAGGAGAAAGAGTCCGTTAAAGGTGCTACTCCACACATACATGCAACATGCTCGTGCCATCGCGCATGCAAACGTCTCGGTTAGTGACAAGTGAGCGCATGCGGACCACACACCCCCTTCTTGCTCAGGCAGCACGGATGAGTAACACACACAGACGCCCACAGCCGGACACCTCTGGAACGCCCGTCCGCTAACATGCACTAATGATTGGGTTAGAGTTCGGCATGCTGGACCTTCTGGACGTGCCGGGGAAGCCCAATGAGGTGTTGGGCACGGGCTACACACCTGACTTCCCTGGGAGGTGCGTCTGGAGGAGATCCAGGAGGCAGCCTTCAGTCGGCCCAGCTCCAGCAGCACCTTGCCCCTGGCGCACTGCAggatcacacacacaactttGGCATTGTGGGCCGTGTCTTCTCGCTCGTATCCTCTCCAACACACTTTCGCATTCTTTCGAGAACCTTTACGCGCGTGCAACACCCTCGCTCTCGTCCAGAGAGCCAACCCCATTGAGCTGAACTCCGAAGGGAGGGTTACGGCCAAACCGCACGGGCTCAATGCAGCCTTATTCAAGCCAACATTTCTCACAATTCAACCAACTGGCACAGCACTGCAGCTGCTCTCTGCCCTGTTCAGAACATTATCGTGAAGGCCTTTTCACATGACTCCCAAAGAAAGAGCGCCATGAATGGACAATTTTCGATTTATTTGCATGGACTGCATAGTGTGTAAAAAACAAACGTCCAAACAACATGACGGATTTACCTGAAGCAAAAATTACGATTTattctgatacacacacacacacacatatatatatatatatatatatatatatatatatatatatatataaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU223382 lncRNA upstream 171 8899799 ~ 8900972 (+) True G150939
TU223384 lncRNA upstream 948 8899576 ~ 8900195 (+) False G150939
TU223383 lncRNA upstream 948 8899799 ~ 8900195 (+) False G150939
TU223381 lncRNA upstream 1677 8899046 ~ 8899466 (+) True G150938
TU223380 lncRNA upstream 2709 8898220 ~ 8898434 (+) True G150937
TU223387 lncRNA downstream 763 8903074 ~ 8905743 (+) False G150941
TU223389 lncRNA downstream 763 8903074 ~ 8905934 (+) True G150941
TU223390 lncRNA downstream 1489 8903800 ~ 8905743 (+) False G150941
TU223392 lncRNA downstream 1489 8903800 ~ 8905300 (+) False G150941
TU223394 lncRNA downstream 5086 8907397 ~ 8908479 (+) True G150942
XM_043222327.1 mRNA upstream 8944 8890622 ~ 8892199 (+) True pdzk1ip1
XM_043223371.1 mRNA upstream 14715 8880269 ~ 8886428 (+) False tal1
XM_043223369.1 mRNA upstream 14715 8880298 ~ 8886428 (+) False tal1
XM_043223370.1 mRNA upstream 14715 8880300 ~ 8886428 (+) True tal1
XM_043223373.1 mRNA upstream 14715 8880302 ~ 8886428 (+) False tal1
XM_043223444.1 mRNA downstream 93660 8995971 ~ 9004905 (+) True tm2d1
XM_043222439.1 mRNA downstream 295713 9198024 ~ 9223536 (+) True frem1b
XM_043222440.1 mRNA downstream 295738 9198049 ~ 9223536 (+) False frem1b
XM_043222443.1 mRNA downstream 321499 9223810 ~ 9227301 (+) True atpaf1
XM_043222442.1 mRNA downstream 326097 9228408 ~ 9235230 (+) True rab3b
TU223378 other upstream 9062 8890643 ~ 8892081 (+) False pdzk1ip1
TU223279 other upstream 283538 8614289 ~ 8617605 (+) True G150862
TU223137 other upstream 732871 8167449 ~ 8168272 (+) True G150756
TU222560 other upstream 2192252 6708488 ~ 6708891 (+) True G150369
XR_006247622.1 other upstream 2393471 6502914 ~ 6507672 (+) False ccnt2b
TU223397 other downstream 16968 8919279 ~ 8919780 (+) True G150945
TU223398 other downstream 19387 8921698 ~ 8921967 (+) True G150946
TU223418 other downstream 85875 8988186 ~ 8988691 (+) True G150965
TU223769 other downstream 552990 9455301 ~ 9530165 (+) False march2
TU223817 other downstream 675368 9577679 ~ 9580151 (+) True G151232

Expression Profile