RNA id: XM_043223507.1



Basic Information


Item Value
RNA id XM_043223507.1
length 911
RNA type mRNA
GC content 0.41
exon number 4
gene id micos13
representative False

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10419127 ~ 10422354 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACGAACTTTATTGCTACCAGCTCGTGCCGCTGGAGCAAATGCCCTTGTCAGTGAAGTTCGCTGTTAAGATAAAGCAAAATATCTTGTAGAGCAAGTTTTTATTTCGCAGTTTTGTGCTTAATATCATACCACTGCTTTTAGCACCATGGCTGCCAAGATTTTGCCTGTAATCAAGTTTGCAACAAAAGTTACCATTGCAGGTGGTGCCCTATATGTTGCATATGATTCAGGACTTCTTGGAGATGGCAAGGAGGGATCGGTTGCCTTAGGTCGAGCTAAAGCTGCCGTCCCGCCTGCTGTGGAGGAGTGGATGAAGTATTTCGGCTTCGAGcttCCTGCCACACCCAAAATCGAGTTCTCGCCACTGGATGCGTGGAACTCAGGGGTCCAGAAGTCTATCCATGCCCTGTCAGTCGGCCCGTCCACAGTTAGTGACTACACAAAACAAGGGCTCCAGTACGTTAAAGACCTCACAAAATGAGCATTTAGTACTTTGAAGTTGCTATTGAACCGTTTCGGTGGATGAGAAGACTCGCTCACTTCACAAAGTGTTTTTTCCCTTAATTCTGTTAAGTTTTGAGGAACAACAAGCAGAATACTTCAAGGTGAAGATAATGTGGTACAAatcaaattgttcttttttaattttttccccgCTTTGGTTACAGAAATAACAGTTTTGAGGAAAAAATGGAGATCCTTATAAGTGTGTTCTATCTGTATATTGCTGTTCAActctcttatttatttaagaaatctCTTCCTAGAAGTGTTCAGTTCTGGCATTGATCTCCCCCCGCAATCATCTGAAATTCTTTTTATATAAGCACTAAATGACTGCAACTGAGTTTTGTATAGTTTATAACCCCGTGTTGCGCCGTctgatgtaaaataaatcacGTTAAATATTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU224187 lncRNA downstream 44550 10375641 ~ 10375960 (-) True G151508
TU224186 lncRNA downstream 44895 10375173 ~ 10375615 (-) True G151507
TU224127 lncRNA downstream 170668 10244918 ~ 10249842 (-) True G151457
TU224138 lncRNA downstream 225653 10189830 ~ 10194857 (-) True G151468
TU224106 lncRNA downstream 347618 10053918 ~ 10072892 (-) True G151439
TU224252 lncRNA upstream 20133 10442487 ~ 10442738 (-) True G151569
TU224270 lncRNA upstream 33017 10455371 ~ 10455631 (-) True G151572
TU224329 lncRNA upstream 286848 10709202 ~ 10709750 (-) True G151612
TU224336 lncRNA upstream 293071 10715425 ~ 10715957 (-) True G151616
TU224427 lncRNA upstream 361284 10783638 ~ 10784242 (-) True G151668
XM_043223900.1 mRNA downstream 24341 10394012 ~ 10396169 (-) True LOC122328192
XM_043223055.1 mRNA downstream 98847 10282022 ~ 10321663 (-) True polrmt
XM_043223518.1 mRNA downstream 232923 10183038 ~ 10187587 (-) True atp5f1d
XM_043223516.1 mRNA downstream 247193 10151462 ~ 10173317 (-) False midn
XM_043223515.1 mRNA downstream 247194 10151462 ~ 10173316 (-) True midn
XM_043223306.1 mRNA upstream 44773 10467127 ~ 11650822 (-) False LOC122327734
XM_043223305.1 mRNA upstream 44773 10467127 ~ 11650822 (-) False LOC122327734
XM_043223304.1 mRNA upstream 44773 10467127 ~ 11650822 (-) True LOC122327734
XM_043223338.1 mRNA upstream 204432 10626786 ~ 10650949 (-) True zgc:165603
XM_043223337.1 mRNA upstream 204438 10626792 ~ 10650952 (-) False zgc:165603
XR_006247701.1 other downstream 98847 10286578 ~ 10321663 (-) False polrmt
TU224081 other downstream 456884 9957811 ~ 9963626 (-) True G151425
TU223881 other downstream 917504 9498680 ~ 9503006 (-) False gpx4a
TU223882 other downstream 918828 9498680 ~ 9501682 (-) True gpx4a
XR_006247699.1 other downstream 1278652 9013553 ~ 9141858 (-) False nfia
XR_006247709.1 other upstream 751789 11174143 ~ 11188678 (-) False rex1bd
XR_006247708.1 other upstream 757350 11179704 ~ 11188678 (-) False rex1bd
unassigned_transcript_2544 other upstream 926026 11348380 ~ 11348451 (-) True trnaq-uug_21
TU225293 other upstream 1623115 12045469 ~ 12049531 (-) True si:ch211-117l17.6
TU225397 other upstream 1720488 12142842 ~ 12145575 (-) True G152276

Expression Profile