RNA id: TU224310


Basic Information

Item Value
RNA id TU224310
length 453
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id LOC122327757
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10701622 ~ 10709755 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAAATTAAAAGGGAAGTTGGTGTCGAGGCTGTGGATATGCGCCTGGGATGTGACGATGCGAGGCTCCGGAAGAGGGCTTGCGGTTGGCGGCGGACTGTCGATGTGATCCGAATGAGGATCTTCGCTGATCCCGCTGTCGCTGGGAGAGGGCGACCAAACTGGAGATCCAGAAACAGAGTCATAGCCACCTAAAAGTGCGTTGAAGAACTCTTCGTTACCCTGAGCGGGCATCATGTGAGGATCTTGAACTGGCCAAGGCTGATCGCTTTGTGGTCCCATAGTCTCATGCCGTAAGATGCCGTCATTCTTATCAAAGAGCAAATCGAGTAGTTCTATCCCTTCACCACCCTGAGGATATATTTGCCTTATATATCATTTGTTGCCACCAAAACAGTTGAAAGCAAGCAAATGTTGAAAAAACTGTTCCATTTTTTGAACTTTGCTCCGTATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU224294 lncRNA upstream 32410 10666056 ~ 10669212 (+) True G151592
TU224196 lncRNA upstream 280586 10388550 ~ 10421036 (+) True G151516
TU224164 lncRNA upstream 352736 10347829 ~ 10348886 (+) True G151487
TU224024 lncRNA upstream 512450 10188578 ~ 10189172 (+) True G151382
TU224015 lncRNA upstream 514039 10185635 ~ 10187583 (+) True G151373
TU224309 lncRNA downstream 5071 10707399 ~ 10709755 (+) False LOC122327757
TU224316 lncRNA downstream 8185 10710513 ~ 10711972 (+) True G151603
TU224372 lncRNA downstream 75399 10777727 ~ 10840314 (+) True G151624
TU224374 lncRNA downstream 77550 10779878 ~ 10787611 (+) False G151624
TU224394 lncRNA downstream 128530 10830858 ~ 10831344 (+) True G151642
XM_043223909.1 mRNA upstream 238425 10457205 ~ 10463197 (+) True rgmd
XM_043222316.1 mRNA upstream 275315 10422888 ~ 10426307 (+) True hsd11b1la
XM_043223903.1 mRNA upstream 283406 10413349 ~ 10418216 (+) True LOC122328195
XM_043223901.1 mRNA upstream 289168 10410257 ~ 10412454 (+) True LOC122328194
XM_043223451.1 mRNA upstream 293139 10407145 ~ 10408483 (+) True LOC122327820
XM_043223318.1 mRNA downstream 13912 10716240 ~ 10720317 (+) True hmg20b
XM_043223231.1 mRNA downstream 18772 10721100 ~ 10759871 (+) True unc13a
XM_043223234.1 mRNA downstream 18772 10721100 ~ 10759871 (+) False unc13a
XM_043223232.1 mRNA downstream 18772 10721100 ~ 10759871 (+) False unc13a
XM_043223235.1 mRNA downstream 18772 10721100 ~ 10759871 (+) False unc13a
XR_006247720.1 other upstream 708181 9970622 ~ 9993441 (+) False gatad2ab
TU223980 other upstream 737988 9923547 ~ 9963634 (+) False LOC122328159
TU223981 other upstream 737988 9928679 ~ 9963634 (+) True LOC122328159
TU223982 other upstream 737988 9931139 ~ 9963634 (+) False LOC122328159
TU223952 other upstream 808133 9888200 ~ 9893489 (+) False borcs8
XR_006247780.1 other downstream 6716 10709044 ~ 10709110 (+) True LOC122328232
TU224353 other downstream 103724 10806052 ~ 10837365 (+) True G151620
TU224351 other downstream 113807 10816135 ~ 10837365 (+) False G151620
TU224458 other downstream 216732 10919060 ~ 10921928 (+) False si:dkey-172o19.2
XR_006247707.1 other downstream 616361 11318689 ~ 11323940 (+) False mier2

Expression Profile