RNA id: TU225706


Basic Information

Item Value
RNA id TU225706
length 241
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G152468
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13056318 ~ 13056558 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gacaattcgtaattatcataattaaaattaggtgtgaaaaccctacataTAATGGTGGAGAATCAAGGCGGGCAAGATTTGATTTtcagttcataattcataaatttgtGATTCGTGATTTCgtggtttttctattttatccgGAAGAATAGattaagacacagagacaaattGTTGTTATTTCGTACCTCTATTTTGACATGCGAACACGTAAAAGTGCGTGTGAATTGTGAAGactttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU225704 lncRNA downstream 1058 13054995 ~ 13055260 (-) True G152466
TU225701 lncRNA downstream 18719 13037379 ~ 13037599 (-) True G152463
TU225691 lncRNA downstream 53434 13002373 ~ 13002884 (-) True G152454
XR_006247716.1 lncRNA downstream 103174 12944294 ~ 12953144 (-) False LOC122327774
TU225677 lncRNA upstream 37547 13094105 ~ 13098776 (-) True G152443
TU225720 lncRNA upstream 44863 13101421 ~ 13167402 (-) True G152472
XR_006247615.1 lncRNA upstream 49634 13106192 ~ 13109794 (-) True LOC122327170
XR_006247616.1 lncRNA upstream 65185 13121743 ~ 13124660 (-) True LOC122327171
TU225754 lncRNA upstream 141480 13198038 ~ 13202236 (-) False si:dkey-222p3.1
XM_043222357.1 mRNA downstream 2743 13051332 ~ 13053575 (-) True LOC122327164
XM_043222356.1 mRNA downstream 34273 13018008 ~ 13022045 (-) True LOC122327163
XM_043222347.1 mRNA downstream 40652 13013881 ~ 13015666 (-) True LOC122327155
XM_043222353.1 mRNA downstream 61219 12993212 ~ 12995099 (-) True LOC122327159
XM_043223533.1 mRNA downstream 78631 12969001 ~ 12977687 (-) True cusr
XM_043222351.1 mRNA upstream 2531 13059089 ~ 13060473 (-) True LOC122327157
XM_043222344.1 mRNA upstream 74948 13131506 ~ 13135336 (-) False LOC122327152
XM_043222343.1 mRNA upstream 74948 13131506 ~ 13135336 (-) True LOC122327152
XM_043222427.1 mRNA upstream 79047 13135605 ~ 13153861 (-) True LOC122327211
XM_043222352.1 mRNA upstream 112390 13168948 ~ 13170194 (-) True LOC122327158
TU225672 other downstream 142092 12906149 ~ 12914226 (-) False cxcl12b
TU225673 other downstream 142092 12906247 ~ 12914226 (-) False cxcl12b
TU225529 other downstream 488973 12560873 ~ 12567345 (-) False LOC122328185
TU225397 other downstream 910743 12142842 ~ 12145575 (-) True G152276
TU225293 other downstream 1006787 12045469 ~ 12049531 (-) True si:ch211-117l17.6
TU225939 other upstream 521243 13577801 ~ 13689607 (-) False LOC122327865
XR_006247594.1 other upstream 768811 13825369 ~ 13829699 (-) False adra2a
XR_006247564.1 other upstream 1340820 14397378 ~ 14425100 (-) False LOC122327056
TU226797 other upstream 2564091 15620649 ~ 15622429 (-) True G153215
XR_006247627.1 other upstream 2793730 15850288 ~ 15852458 (-) True LOC122327278

Expression Profile