RNA id: XM_043222307.1


Basic Information

Item Value
RNA id XM_043222307.1
length 1433
RNA type mRNA
GC content 0.39
exon number 9
gene id kcnip2
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 14071476 ~ 14078380 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAGAAATAAGCTGAACAGGTGTTTGAAATAATTCACCAAAATGAAGTCTCGTGAAGTAGGCTGACGACAGATACGCAAATAAAGCTCGGTAAAGAAACACACTCGGTGAAACGCGTTTTTAAGgtaACCCTCCCTCAGGCCAGAGCAAAAAGAACATGAAGCAGCGCTTCCTCAAACTTCTGCCCTGCTGTCACGTTGACTCCACACCATCCGTCAGGCAAAACAGTATAGAGGAAGACTTTGAGCTGGCCACTGTGTGCTGCAGACCGGATAGTCTGGAAAAAGTTATGGAACAGACCAAATTCTCCAAAACAGAGCTACAAATCCTCTATAGAAgtttcaaaaatGAATGTCCCTCTGGATTAGTAAACGAAGAGACTTTTAAGTTAATCTACTCTCACTTTTTTCCTCACGGAGATTCTAGCGCGTACGcacatttcctgtttgaggCTTTTGACAGACACAAGAACGGAGCAGTAAGTTTTGAGGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU226035 lncRNA upstream 45908 14027491 ~ 14027914 (+) True G152708
TU226034 lncRNA upstream 74574 13993072 ~ 13999248 (+) True G152707
XR_006247772.1 lncRNA upstream 108010 13963124 ~ 13965812 (+) True LOC122328070
TU225953 lncRNA upstream 221386 13850304 ~ 13852436 (+) True LOC122327202
XR_006247620.1 lncRNA upstream 222862 13849135 ~ 13850960 (+) False LOC122327202
TU226060 lncRNA downstream 68396 14146770 ~ 14147192 (+) True G152725
TU226061 lncRNA downstream 68843 14147217 ~ 14147664 (+) True G152726
TU226062 lncRNA downstream 70802 14149176 ~ 14149494 (+) True G152727
TU226063 lncRNA downstream 92789 14171163 ~ 14171473 (+) True G152728
TU226064 lncRNA downstream 93570 14171944 ~ 14172255 (+) True G152729
XM_043222432.1 mRNA upstream 15242 14040721 ~ 14058580 (+) True LOC122327219
XM_043222319.1 mRNA upstream 525393 13541190 ~ 13548429 (+) True LOC122327135
XM_043222320.1 mRNA upstream 525393 13541190 ~ 13548429 (+) False LOC122327135
XM_043222321.1 mRNA upstream 525393 13541190 ~ 13548429 (+) False LOC122327135
XM_043223201.1 mRNA upstream 534796 13517128 ~ 13539026 (+) True LOC122327695
XM_043222277.1 mRNA downstream 576 14078950 ~ 14088700 (+) True arhgap19
XM_043222243.1 mRNA downstream 12176 14090550 ~ 14130334 (+) True slit1b
XM_043223347.1 mRNA downstream 123754 14202128 ~ 14246917 (+) True si:ch211-126j24.1
XM_043223348.1 mRNA downstream 123754 14202128 ~ 14246917 (+) False si:ch211-126j24.1
XM_043223349.1 mRNA downstream 123755 14202129 ~ 14246917 (+) False si:ch211-126j24.1
TU226044 other upstream 31301 14040724 ~ 14042521 (+) False LOC122327219
XR_006247779.1 other upstream 106597 13967107 ~ 13967225 (+) True LOC122328230
TU225879 other upstream 391875 13575738 ~ 13681947 (+) True G152584
TU225846 other upstream 655415 13417464 ~ 13418407 (+) True G152565
TU225829 other upstream 690045 13383153 ~ 13383777 (+) True G152558
TU226124 other downstream 379775 14458149 ~ 14462660 (+) True G152767
TU226184 other downstream 608130 14686504 ~ 14691808 (+) True G152808
TU226683 other downstream 1134084 15212458 ~ 15216942 (+) False kif14
TU227010 other downstream 1926190 16004564 ~ 16035615 (+) True G153322
unassigned_transcript_2545 other downstream 2044066 16122440 ~ 16122512 (+) True trnaa-agc_18

Expression Profile