Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU227020 |
| length | 596 |
| lncRNA type | sense_over |
| GC content | 0.32 |
| exon number | 1 |
| gene id | LOC122327825 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056720.1 |
| NCBI id | CM032089.1 |
| chromosome length | 18002998 |
| location | 16077581 ~ 16078895 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU227009 | lncRNA | upstream | 95451 | 15982592 ~ 15982822 (+) | True | G153321 |
| TU227008 | lncRNA | upstream | 96927 | 15981122 ~ 15981346 (+) | True | G153320 |
| TU226822 | lncRNA | upstream | 185135 | 15891038 ~ 15893138 (+) | False | LOC122327891 |
| XR_006247733.1 | lncRNA | upstream | 185143 | 15891084 ~ 15893130 (+) | False | LOC122327891 |
| TU226875 | lncRNA | upstream | 241519 | 15835260 ~ 15836754 (+) | True | G153236 |
| TU227040 | lncRNA | downstream | 84515 | 16163383 ~ 16168121 (+) | False | LOC122327131 |
| TU227041 | lncRNA | downstream | 84515 | 16163383 ~ 16164196 (+) | False | LOC122327131 |
| TU227043 | lncRNA | downstream | 92025 | 16170893 ~ 16171468 (+) | False | LOC122327131 |
| TU227077 | lncRNA | downstream | 171572 | 16250440 ~ 16250973 (+) | True | G153364 |
| TU227140 | lncRNA | downstream | 224863 | 16303731 ~ 16305650 (+) | True | G153399 |
| XM_043223557.1 | mRNA | upstream | 121963 | 15943733 ~ 15956310 (+) | True | LOC122327890 |
| XM_043223556.1 | mRNA | upstream | 122313 | 15943733 ~ 15955960 (+) | False | LOC122327890 |
| XM_043222435.1 | mRNA | upstream | 140091 | 15901132 ~ 15938182 (+) | True | LOC122327226 |
| XM_043222434.1 | mRNA | upstream | 192028 | 15879254 ~ 15886245 (+) | True | LOC122327224 |
| XM_043223394.1 | mRNA | upstream | 325786 | 15735901 ~ 15752487 (+) | True | aspm |
| XM_043222436.1 | mRNA | downstream | 19863 | 16098731 ~ 16099807 (+) | True | LOC122327228 |
| XM_043222437.1 | mRNA | downstream | 74274 | 16153142 ~ 16155551 (+) | True | LOC122327230 |
| XM_043222314.1 | mRNA | downstream | 84521 | 16163389 ~ 16171629 (+) | True | LOC122327131 |
| XM_043222315.1 | mRNA | downstream | 84521 | 16163389 ~ 16171629 (+) | False | LOC122327131 |
| XM_043223165.1 | mRNA | downstream | 154739 | 16233607 ~ 16237021 (+) | True | LOC122327679 |
| TU227010 | other | upstream | 42658 | 16004564 ~ 16035615 (+) | True | G153322 |
| TU226683 | other | upstream | 861331 | 15212458 ~ 15216942 (+) | False | kif14 |
| TU226184 | other | upstream | 1386465 | 14686504 ~ 14691808 (+) | True | G152808 |
| TU226124 | other | upstream | 1615613 | 14458149 ~ 14462660 (+) | True | G152767 |
| TU226044 | other | upstream | 2035752 | 14040724 ~ 14042521 (+) | False | LOC122327219 |
| unassigned_transcript_2545 | other | downstream | 43572 | 16122440 ~ 16122512 (+) | True | trnaa-agc_18 |
| unassigned_transcript_2548 | other | downstream | 47668 | 16126536 ~ 16126608 (+) | True | trnaa-agc_19 |
| unassigned_transcript_2549 | other | downstream | 49042 | 16127910 ~ 16127982 (+) | True | trnaa-agc_20 |
| unassigned_transcript_2551 | other | downstream | 50418 | 16129286 ~ 16129358 (+) | True | trnaa-agc_21 |
| unassigned_transcript_2553 | other | downstream | 51765 | 16130633 ~ 16130705 (+) | True | trnaa-agc_22 |
