RNA id: TU227595


Basic Information

Item Value
RNA id TU227595
length 654
lncRNA type inter_gene
GC content 0.63
exon number 2
gene id G153743
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 17939881 ~ 17940860 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccaacggagtgggtgtgttcgagaggaggggcgtggtattggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgctctcctcgggagaccggtctcttccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcacgatggacctcaccccgccgtcccgtcacagtggtggagaatgcgggcaaggcggagcttagacggcacagttgggcaacatctgatgacgtcatcccctctcgctggtacccatgccgggacggaggaacaacggagactcgctcccagccaccaggaagggtaagtgcgcgcttgcgtttactgtcatttacccggtggctggttgagcattccgactaattcccggtttctctgtcccggtgcgagaggggagttgcccggagaggaatccctgccccgcccactccgaccgctggagcctggttgaggaaggtagcactcctgcgtgggcggcgaccgcctgacggggttgacgcttggggaggaatgtgacgagtcggctgccc

Function

GO: NA

KEGG:

id description
ko00290 Valine, leucine and isoleucine biosynthesis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU227592 lncRNA upstream 53005 17886646 ~ 17886876 (+) True G153740
TU227589 lncRNA upstream 55960 17883613 ~ 17883921 (+) True G153737
TU227477 lncRNA upstream 465281 17473241 ~ 17474600 (+) True G153654
TU227476 lncRNA upstream 467035 17471900 ~ 17472846 (+) True G153653
TU227470 lncRNA upstream 497702 17441873 ~ 17442179 (+) True G153647
XM_043223106.1 mRNA upstream 198864 17696875 ~ 17741017 (+) True LOC122327646
TU227593 other upstream 12637 17926351 ~ 17927244 (+) True G153741
TU227461 other upstream 520648 17415453 ~ 17419233 (+) False tsc22d2
XR_006247623.1 other upstream 1193806 16600632 ~ 16746075 (+) False dock3
TU227194 other upstream 1440468 16493702 ~ 16499413 (+) True G153432
TU227165 other upstream 1553705 16317461 ~ 16386176 (+) False rpl32

Expression Profile