RNA id: XM_043222444.1


Basic Information

Item Value
RNA id XM_043222444.1
length 7887
RNA type mRNA
GC content 0.47
exon number 24
gene id grip2b
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 16382185 ~ 16477611 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGCAGTGGGATAAAGCTTcacagtgtgagagagagaggcaaactgggatatatttctatttatttcccCCCTCTGTTCCCGTTTCTTGGCtcgttgcaaaaaaaaaaaagaaatcaaacgAAAACAGTGGCAAATTTAGCATCCTAGCAGCCAGAGCGTCTCCTCGTTCAGAAGACTCTCCGTGTCTAATGTGACACGTTGGGGTGGAATCGTGGGACATTCGGTCACGCAGAGCTAAGGGAAGGATGGATAGAGTGAACCGGGTTTTAAACATCGTAAGACAGATGTCTCCCAGGAAAAGGGAAAGAGGGTCTCATTGGGAGGCGGAGAGCCCGGAGACCTGCGAGGAGAGTCTGTGCTCTCTCAGCCTTTGCATCAGCGACGATGGGCCGTACTCGAAGGGGAACAAGGACTCGACGGGGCCGGACAACTCGCTCACGTCCAGAAGACAGAGCATCCCAGAACTGCGTGGGGTTACGCTGGTTGAGCTGATTAAGAAGGAAGGAAGCACTTTAGGTCTCACCATCTCGGGCGGAACAGACAAGGACGGCAAACCCCGCGTCTCTAACCTGCGGCCGGGTGGACTGGCGGCTCGGAGCGATCAGCTCAATGTGGGCGACTACATCAAGTCCGTCAACGGCATCAACCTGACCAAGCTGCGTCACGACGAGATCATCAGTCTGCTAAAAAACGTAGGCGAGCGCGTTGTGCTGGAAGTGGAGTATGAGCTGCCTTCACCTGCGCCAGACAGTACCTCAGGTGTTATTTCCAAGACAATCGAGATATGTTTGCAGAAAGAGGGCAACAGTTTCGGCTTTGTCATGCGAGGTGGATCCCACGAAGACTGGCACAGATCCCGTCCTTTGGTGGTCACACACGTCCGACCCGGTGGTCCTGCTGACAGGGAGGGGACTCTGAAGGCCGGCGATCGGATCCTGAGTGTGGATGGAGTGGTTTTACACAGCGCTAGTCTGAGCGACGCTCTCACGGTCCTGACTCAGTGTGGCCAGGAGGCTCTGCTCCAGATCGAGTATGACGTCTCCATCATGGACTCGGTGACGAACGCTTCAGGTCCTCTGCTGGTGGAGATTGCCAAGGCTCCCGGAGCCAGTCTGGGAATCACTCTGACCACTGCCatgcacagaaacaaacaggccATCGTCATCGACAAGATCAAGCCGGCCAGTGTGGTGGACAGTTGTGTGTCTGCGCCGCAGGTCCGGAGCGTTACACGTGGGCGATCACATCCTGTGTATAGACGGCACCAGCACCGAACACTGCTCCGTCCTGGAGGCCACGCAGCTGCTGGCCAGCACCACCGACCAGACCAAACTAGAGATCCTCCCCGCACACCAGACACGCCAGCCCGGGAAACCCCAGGACACTGTGATATTCAGAAGAGTGACCACCCGCACTGCTGGGACCCCTGTGTGAACTACTGCCATTCTCAACATCCTGGTCACTGTAAGACCTCCACGTGGACCTCTGCTTCCAGCAACCCATCCAGCTCTCAGGATTACTGCAAATCGGTAGTCTGCACTAACTTCTCTCCTGGGTCCACTACCACGTCAGGCATGACCAGCCAGGGCTCCAGCACGCTGCCCCGGGCCGCTCCTCCCATGAGCCCACGGAACTCCATGCTAAAGAGACGACAAAGGAAAAAAGAGCACAAAAGCTCCTggttttCTCTGTGTTTAGCCGTGTCTTTAGCCTCAAGTTCTGTGGGCCCTGGTGGTCAGATCGTCCACACCGAGTCCAGTGAGGTCACTCTGAGAGGAGACCCTCTAAACGGGTTTGGGGTTCAGCTGCAGGGTGGGATATTTGCGACGGAGACCCTCTCTGCACCCCCTCTTATCCGCTTCATAGAACCGGACAGCTCGGCCGAAAGGTGTGGGCTTCTCCAGGTTGGGGACAGAGTCTTGTCCATCAACGGAATTCCTACAGAAGACGGAACGCTGGAAGAAGCCAATCAGCTGCTCCGAGACGCGGCTCTGGCCAATAAGGTCACGCTAGAGATTGAGTTTGATGTAGCAGAGTCGGTCGTGCCTAGCAGTGGAACGTTTCACGTGAAGCTGCAGAAGAAGCGAGGAGTGGAGCTGGGCATCACAATCAGCGCCAGTAAGAAACCAGGAGAGCCTCTTATCATATCTGACATTAAAAAAGGCAGCATGGCACACAGAACAGGAACTCTGGAGCCCGGAGACAAGCTGCTGGCGATAGATAACATCCGTCTGGAGAACTGCTCCATGGAGGACGCCGTCCAGATCCTCCAGCAGAGCGAAGACCTGGTCAAACTCAAGATCCGCAAGGATGAGGACaactcagacgAGCAGGAGTCCTCCGGCTCCATCATCTACACGGTGGAGCTGAAGCGCTACGGCGGCCCCCTGGGGATCACCATCTCCGGCACCGAGGAGCCCTTCGACCCCATCATCATCTCAGGCCTGACCAAGAGAGGCCTCGCCGAGAGGACCGGGGCCATTCACGTGGGAGATCGTATCCTGGCCATCAACAGCGTGAGTCTGAAGGGGAAGCCTCTGAGTGAAGCCATACACCTGCTGCAGATGGCGGGAGAAAGCGTCACCCTGAAGATCAAGAAACAGACCGACGcagatgataaaaacaaagagaacGACCTGGATAACGATCTGAGCGACAACGAGGACGAGATGACCGACTCTCAGAGGACCAATAAGCTGTCGGACGTGTACTCCACCACCATCCCCAGCGTGGACTCGGCCATGGAGTCGTGGGACGGCTCGGGGATCGAAGGGGTGTACGTCCAGCAGGCGGCGGGCATCGCCCTGCATCCTCACGAGTGGAGGAACAGCAAGCAGAGGAACAGCACGCCCCCTCCGTCCCGCCGCAAGAACTACCCCTTCAGCGACGGAGGCTTCAGCGAGGACGACTGGGACAAGGCCGCCGGATACAGCAGTCAGCCGCACGCCGACGGCCTCATGATGGAGCAGGAGGACAGCTTCTGGTGTCAGGCCCTGGAGGACCTGGAGACCTGCGGCCAGTCCGAGCTCCTGAGAGAGATCGAgGCGTCGATAATGACCGGCAGTGCCCTGAGTCTGGGTGTAGAGGGTGGAAAGGCCCACGGCGACACCGTCAACCAGCCTCACCTCAGCCCGCTGAGAAAAGCCCCGCATCTCCTCAACGAAACCAAGAACAAGAGCACGCTCCGCATGTCCGAGAAGACCTGGGAGTCCCGGAGGATCAAAGAGGAGATCCAGGACATCCTGTCTCCCACACCGCTGGAGCTGCACAAGGTGGGAAACATAGACACTGTGACTGTGATGAAAGACCCCGAGAGCGATGACTTTGGATTCAGCGTATCCGACGGTTTCCTGGAAAAGGGTGTTTACGTGAACATGATCAGACCTGAAGGTCCAGCGGACCGTGCTGGACTCAAACCGTACGACAGGATCCTTCAGGTGAATCACGTGCGGACGCGAGACTTCGACTGCTGCTTAGCCGTGCCCCTCATCACCGAGGCCGGAGACAAGCTGGAGCTGGTGATTAGCCGAAACCCGCTAGCCCAGCCGTCTGCCGCCCAGCCCCACGACTGCCATCCTCACTTCCACCCCGTGGGTCAGCCCCGTGAGCAGCACACCAGCACGCTGGACCTGTGACCAGAGATCGGAGCGCTCCACAGGATCTGAgccacttctttctttcttaacagaacgaagcaaaacaaaagaaaagtcaCCGAACTACTAGAAGGCATACCCTGAACACGGACAGGATGTCCTGTCTTTTCTTTACTGCGGAGCCTAGCGTGTGACAGCAGGGGAAAATCTCGATAGAATGGCCACAAAATAAGAATTCGTTTTCATGACGTAAACGCTTTGCACTGATTTGGTTCACGTACTGAATCATGACCTCCGCCATGTTTTACTGATTCGTCACTGCATTTAGCAAGTCGTGGCCTCATTATTTTAGGAAATCATGGtcatgttgtaataatgggttCCCTTGGTTTAACAACATCACGCTCATATGCTACGGATTTCTTCccttgtttcagttgttttactgatttgtTTCCTTGTTTTATTTGTCGATTCATTTTCTAGTTTTAGTAAGTCGGCTCTAATTCGTTCCCTTGTGCATTCAGCTAAAACatagaaatttaatttaatttttaatttgtggcCAAAATATCGATTTTTTCCCCCTTAcactcttttcatttcattttcctttcttttttttcacataaaaacatactgtgtacaaatgtttacaaaactaaaaataattctgCTTTTGAAGTAGATCGCCATTAGACGTAAACGTTCTTTAAATGTTTCGTATGTTTCCATGTTCAGTAGCAGTTTTTACTTCCAAAACAAACTAGGAATTagtctttattttagttttaggccTGGATGAGTCACTGCAGGAACACCTTCAGGCACACATTGTCCTttctcacaaacacatacaccCTACtataaacagacaaaacacCACCGTTCTTTGTTCCCTAAACGCATAAACAGTATAGACTCCctacaaataaacttaaatcTGCCTCTGTGTgagacacaaacatacacacaagcGCTCCGGGCCACGAGTGCCATGACAACAATACACACGGTGACTGCCTGCTGCTGCTTGATATCACCAACAAAGACTTCACCGCTGACCAATCAACAACACTTCCTAGCAGTATGATGCACTTTCCATGAATCTGGTATATTTTAGTGTGACATTATTTCAAAAGACAGAAAATCGCAtaatacagacacacacgcatatatatatatatgtcatgaGGTTGTTTAGATAtgttacatattatataacTCAAAATGGAAGGCACATAGTTCTAAACACACCACAGATTAGTCATGCTATTTCGCACAATGTGCataattttatcttatttatttttagtttttaaattttatccACCAGAAtcaatatttagcattttgtgtTCAACCCTGTTACTTTATAAAAtcccaataataataataataatatatatatatatatatatgtatttatatatatatatatatatatatatatatatatatatatataagtaaaaataacaagtaaataatatttccatAATACTAATGTTAAGCTTGATAGTTCAACTctgttattgtaataaaaattttcaaacaaatgtatttgaattaaaatgatttgtcaaATGCAGttattaataactaaaaacCAACATTTGATCCCAAACGAGTTGGCCTCTAACGAGAAATGGCTTAATTTCGGCAAAGTTTTATAAACAGGGTTGAAATATAAAAttgctggaaaaataaaaccaaaaaattagACCAAAATGAATAATCAATATTTTCTGAAGGAAAGTGACTGCGTACAAAAGTGTGCAGTTTTACCCAGTTTGTGCAAAGTGCATTTGCTCAAGATACTTTGATGAGAAACAAGAACGTGTGATAATGACAAGCACACACTTGATTTGTGACTCCCGTTTAGTGCGCGCGTGCTCTAGTACGTACTTCCATTCCCTCAAACGGCCACCTGTACACTCATGCACATGGAGTTTGACTTCATTGACATGTCATTGACTTCTTGAAAGCTTATCGTAGTAAGTACAGTGGTAGCCCTACTCTTCTCATACCTCTGTTGATCTTTTAACACCAAACTGCTGCCGTAATGTAGCATTCGCTCCGGTCCCCGCCAGCGTCCAGGCCTCAAGGGCACGTTCTTTCACCCTCGACTGTCGCCAGGCTGCCATTTACCCACCACTGgccaaatattacaaatgtttcCGCCACAATCTATTTCGGACACATCAGTTCAGAAACGTTTGTAAAGCCATCACACCGTACTTCAACTCGTGTTCGGCCCCCAGGTTTCACGAAGGTCACGTTTCTGTGGACATGTGCAGTCTATTAACCTCCACTAAACATTCATGTAGTGTTGCACCGACGGGAGATTTATGGTATCCATTGAATAACTCTTGACAACTGAAAGGGGAACTGAGGACGTTCAGTGTTGTCTGTTGTGTGTCGTTTAGGTCATGGAGTATTCTGCTGCTATGAGAACCCTCTTCTGTGGGACTGGTTAAAGCGGTTAAAGTGCACTGGCTTGAGGGTGTGTCTGATCCCTTTGTGTGAGTTTGTAGGCTCTAGATATATGGAATCTGAATGTCTTTGAAGTTTCTTGAGAAATACCGTTGGGATGCCTCCTGACTAGGTCTGGGAATCAATAACCGGTTTTATTCTGCGAActggttacattttttttgcgtATGCAAAAGGAACACTGTGTTCTAAATActctaaaaaacaacaacgtcTTTAATTGGGTTTCTTGAAAAGCACCGTTAGGTTGCCTCCTGACTAGATTTGGGAATCAagaagcatttttatttcagaaaattgtTCAATTTTTTGCATGGGAACACTGCGTTATAAATAgtctaaaaaactaaaacattgtCTTTTAATTGGGTTACAATTCCAATACACATTTGGAACAGACCCTACACTGTACTTTTGCAACTTGATGGACAAGGTCATTGTGAACTGTTGTATGAAGCcgcatattataatatacacacacacacacacaatgcattttaataaatgacgccatatattcttaaaaataaaggttccaacgTAGGGGGCTTTacagtttgttagttttttatctaaagaacatttttatggAATTAAAAATTTCTGGACATTACAGTCTTCTCACGGACCATCATTGtgaataaagaacctttatttttaagagtacgAGTCAATAATGACTCAAATAAGTTTGGTTTTGCGGTTAAGTCCTCCTTCAAAACACCAAAAAGTCACTCACATGGACTGACGAGAGCTGCTGTATATTTGTCTTTCTTGGTTCTTGCGTATGGTTATTAAACCATAAGCAATGCTCAGCTCAGCTATACCCTGTTTTTCCCTCGTTCAGGACTTCCTGGTGTGATTCGAGCCCTTTTCCCACACTTTAAAAGTCTGATTTTTGGGGTTATTTCTCCTTCAGTGTGGTCCTGTCCACACCAAAACACTTATACCCTGTAATTATTTGTGGATTAGGTGAATTTATTTCCTCACCCTGCAGTCTTTACTACCATGTTGGAAGCACAAGCAAAATCTATTTGCAGTCAAGTAGAAAGCACTCATTGTTCTACAAGACTTTGTTGAACAATCCCAGTCTCTGTTCAGGCCCATCGCATTAGGAGTCTACCCAGGGCTTGCTCCTAGGCCCCTTTAAGTTTTCGTTTTTTTCCTCCCCGCTACCTTCCTGTCAGTTGCGTAATTCTCCTAACTGCCTCCAAAAGCTGACTACAAAAAAAGAGGACctttattttatgtgaaattactttattttgggTCTACTTTGTGGTAGAACACATTTTGTCTGCAGGACATCACATTGCAGGCAAGTAAGCGAGGTCTCAGAGAAAGGGACGGTTTGATTTCGGAGATGTTTCACCATGGTATTGTTCAGTGTAAGTATTTTAACATGTCGTATGTACTATTCCAGAAAGCAAGGCTATGGGTTCCTTTTATACGTGCAATATTGAGACCAGAAAAGGCTTTTAAAAGGATTTTACATAAGCTTTATAAAGCTCCAAACGTGTTCATCCCTATGCATTTTGAATTCCTGATTAATGTATGCATTgatattaatgtgtatttttgaatgTGTAATATGAAAGTTCTATTCTctgtacagtatttttgtatGAACTCTAAACCTTGCTGTTTCCACAGCGCATTTGAAGCACAACGGAGAAAGAGAACCAATAATCAAGTCTATTCTTCTTTGGCTAGACAAACCCATTCCTAATCGATACAGGAATGTGCTAACGATATCCTTTTCtaaaacaactgaataaaaagaGGTCAAATGCA

Function

GO: NA

KEGG:

id description
K20251 GRIP; glutamate receptor-interacting protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU227140 lncRNA upstream 76536 16303731 ~ 16305650 (+) True G153399
TU227077 lncRNA upstream 131213 16250440 ~ 16250973 (+) True G153364
TU227043 lncRNA upstream 210718 16170893 ~ 16171468 (+) False LOC122327131
TU227040 lncRNA upstream 214065 16163383 ~ 16168121 (+) False LOC122327131
TU227196 lncRNA downstream 24143 16501754 ~ 16502104 (+) True G153434
XR_006247619.1 lncRNA downstream 45019 16522630 ~ 16526785 (+) True LOC122327176
TU227198 lncRNA downstream 45122 16522733 ~ 16526808 (+) False LOC122327176
XR_006247769.1 lncRNA downstream 57408 16535019 ~ 16545350 (+) True LOC122328065
XR_006247770.1 lncRNA downstream 57408 16535019 ~ 16545350 (+) False LOC122328065
XM_043223195.1 mRNA upstream 45068 16329725 ~ 16337118 (+) True sec13
XM_043222222.1 mRNA upstream 62808 16317387 ~ 16319378 (+) True rpl32
XM_043223756.1 mRNA upstream 137644 16241163 ~ 16244542 (+) True LOC122328055
XM_043223757.1 mRNA upstream 137644 16241163 ~ 16244542 (+) False LOC122328055
XM_043223165.1 mRNA upstream 145165 16233607 ~ 16237021 (+) True LOC122327679
XM_043222472.1 mRNA downstream 123019 16600630 ~ 16746196 (+) False dock3
XM_043222473.1 mRNA downstream 123023 16600634 ~ 16746142 (+) False dock3
XM_043222470.1 mRNA downstream 123039 16600650 ~ 16749928 (+) False dock3
XM_043222469.1 mRNA downstream 123050 16600661 ~ 16749928 (+) False dock3
XM_043222466.1 mRNA downstream 123051 16600662 ~ 16749928 (+) True dock3
unassigned_transcript_2576 other upstream 232342 16149772 ~ 16149844 (+) True trnaa-agc_28
unassigned_transcript_2572 other upstream 235049 16147065 ~ 16147137 (+) True trnaa-agc_27
unassigned_transcript_2570 other upstream 236434 16145680 ~ 16145752 (+) True trnaa-agc_26
unassigned_transcript_2563 other upstream 243264 16138850 ~ 16138922 (+) True trnaa-agc_25
unassigned_transcript_2559 other upstream 245994 16136120 ~ 16136192 (+) True trnaa-agc_24
TU227194 other downstream 16091 16493702 ~ 16499413 (+) True G153432
XR_006247623.1 other downstream 123021 16600632 ~ 16746075 (+) False dock3
TU227461 other downstream 937842 17415453 ~ 17419233 (+) False tsc22d2
TU227593 other downstream 1448740 17926351 ~ 17927244 (+) True G153741

Expression Profile