Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043222770.1 |
| length | 1428 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 8 |
| gene id | gpd1b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056720.1 |
| NCBI id | CM032089.1 |
| chromosome length | 18002998 |
| location | 4773807 ~ 4777213 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0046168 | glycerol-3-phosphate catabolic process | biological_process |
| GO:0005975 | carbohydrate metabolic process | biological_process |
| GO:0009331 | glycerol-3-phosphate dehydrogenase complex | cellular_component |
| GO:0042803 | protein homodimerization activity | molecular_function |
| GO:0051287 | NAD binding | molecular_function |
| GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | molecular_function |
| id | description |
|---|---|
| K00006 | GPD1; glycerol-3-phosphate dehydrogenase (NAD+) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU221344 | lncRNA | downstream | 49176 | 4713048 ~ 4724631 (-) | True | LOC122327545 |
| TU221346 | lncRNA | downstream | 50519 | 4714165 ~ 4723288 (-) | False | LOC122327545 |
| TU221325 | lncRNA | downstream | 92731 | 4679919 ~ 4681076 (-) | True | G149594 |
| TU221329 | lncRNA | downstream | 102037 | 4662075 ~ 4671770 (-) | True | G149598 |
| TU221323 | lncRNA | downstream | 147902 | 4625597 ~ 4625905 (-) | True | G149592 |
| TU221918 | lncRNA | upstream | 155236 | 4932449 ~ 5041927 (-) | True | G149955 |
| TU221917 | lncRNA | upstream | 156794 | 4934007 ~ 5037555 (-) | False | G149955 |
| TU221919 | lncRNA | upstream | 162222 | 4939435 ~ 4939839 (-) | True | G149956 |
| TU221923 | lncRNA | upstream | 180188 | 4957401 ~ 4965758 (-) | True | LOC122327586 |
| XR_006247662.1 | lncRNA | upstream | 180346 | 4957559 ~ 4965773 (-) | False | LOC122327586 |
| XM_043222976.1 | mRNA | downstream | 1064 | 4770578 ~ 4772743 (-) | True | LOC122327538 |
| XM_043223866.1 | mRNA | downstream | 6279 | 4760030 ~ 4767528 (-) | True | LOC122328160 |
| XM_043222653.1 | mRNA | downstream | 16375 | 4750241 ~ 4757432 (-) | True | LOC122327350 |
| XM_043222602.1 | mRNA | downstream | 27850 | 4738382 ~ 4745957 (-) | True | LOC122327323 |
| XM_043222990.1 | mRNA | downstream | 50733 | 4715830 ~ 4723074 (-) | False | LOC122327545 |
| XM_043222651.1 | mRNA | upstream | 770 | 4777983 ~ 4785215 (-) | True | smarcd1 |
| XM_043222641.1 | mRNA | upstream | 13334 | 4790547 ~ 4830499 (-) | True | asic1b |
| XM_043222572.1 | mRNA | upstream | 238878 | 5016091 ~ 5021442 (-) | True | LOC122327307 |
| XM_043222906.1 | mRNA | upstream | 282985 | 5060198 ~ 5071072 (-) | True | LOC122327494 |
| XM_043222905.1 | mRNA | upstream | 289883 | 5067096 ~ 5071072 (-) | False | LOC122327494 |
| XR_006247647.1 | other | downstream | 36947 | 4716738 ~ 4736860 (-) | False | LOC122327545 |
| TU221294 | other | downstream | 185385 | 4585468 ~ 4588422 (-) | True | LOC122328156 |
| XR_006247639.1 | other | downstream | 287464 | 4482821 ~ 4486343 (-) | True | LOC122327455 |
| XR_006247643.1 | other | downstream | 340307 | 4429820 ~ 4433500 (-) | False | LOC122327456 |
| XR_006247637.1 | other | upstream | 368713 | 5145926 ~ 5153856 (-) | True | LOC122327354 |
| XR_006247634.1 | other | upstream | 750344 | 5527557 ~ 5532809 (-) | False | gls2b |
| XR_006247648.1 | other | upstream | 761343 | 5538556 ~ 5542080 (-) | True | bloc1s1 |
| TU222186 | other | upstream | 761348 | 5538561 ~ 5542059 (-) | False | bloc1s1 |
| XR_006247631.1 | other | upstream | 867200 | 5644413 ~ 5652158 (-) | False | nisch |
